RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FBXO30Q8TB52 745 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
DDX41-204ENST00000504807 TMCO6Q96DC7 493 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 CCDC126Q96EE4 140 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 GIMAP5Q96F15 307 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 OTUB1Q96FW1 271 aaPredicted RBP11.88□□□□□ -0.51
DDX41-204ENST00000504807 DOCK7Q96N67 2140 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 DSN1Q9H410 356 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 NEUROD4Q9HD90 331 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 FBXO34Q9NWN3 711 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 TAS2R9Q9NYW1 312 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 MED11Q9P086 117 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 ZNF629Q9UEG4 869 aaPredicted RBP11.88□□□□□ -0.51
DDX41-204ENST00000504807 GRID1Q9ULK0 1009 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 ANK2Q01484 3957 aa11.88□□□□□ -0.51
DDX41-204ENST00000504807 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 LSM1O15116 133 aaKnown RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 AKAP10O43572 662 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 SEC22BO75396 215 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 TNFSF13O75888 250 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 BCAS2O75934 225 aaPredicted RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 IL2RAP01589 272 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 TMIGD3P0DMS9 266 aaPredicted RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 CTSSP25774 331 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 IL12BP29460 328 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 NKX6-1P78426 367 aaPredicted RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 HSPB3Q12988 150 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 TRABD2AQ86V40 505 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 IFNEQ86WN2 208 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 CCDC63Q8NA47 563 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 HOXB13Q92826 284 aaPredicted RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 INTS12Q96CB8 462 aaKnown RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 C3orf30Q96M34 536 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 TSSK3Q96PN8 268 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 LMF2Q9BU23 707 aaKnown RBP11.87□□□□□ -0.51
DDX41-204ENST00000504807 LRTM1Q9HBL6 345 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 EQTNQ9NQ60 294 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 MIEF1Q9NQG6 463 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 GIMAP4Q9NUV9 329 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 SENP1Q9P0U3 644 aa11.87□□□□□ -0.51
DDX41-204ENST00000504807 PCNX3Q9H6A9 2034 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 TLDC2A0PJX2 215 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 A6NNC1 897 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 EEF1E1-BLOC1S5C9J1V9 151 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 FAM47E-STBD1D6RA91 191 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 H0Y3Z8 333 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 AZIN1O14977 448 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 EEF1E1O43324 174 aaKnown RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 HCRTR2O43614 444 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 GMFGO60234 142 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 ABCB7O75027 752 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 CDH16O75309 829 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 SPAG7O75391 227 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 ACP2P11117 423 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 DPP4P27487 766 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 FRKP42685 505 aaPredicted RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 RFX3P48380 749 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 CCT5P48643 541 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 CLDN20P56880 219 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 RPL38P63173 70 aaKnown RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 PDE7AQ13946 482 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 EFR3AQ14156 821 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 GRAMD1BQ3KR37 738 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 FLYWCH1Q4VC44 716 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 LUZP2Q86TE4 346 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 SAMD14Q8IZD0 417 aaPredicted RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 FAM76AQ8TAV0 307 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 FIG4Q92562 907 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 C16orf58Q96GQ5 468 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 APOPT1Q96IL0 206 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 SFXN2Q96NB2 322 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 FAM111AQ96PZ2 611 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 UCN2Q96RP3 112 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 SIRT3Q9NTG7 399 aaPredicted RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 DDX18Q9NVP1 670 aaKnown RBP11.86□□□□□ -0.51
DDX41-204ENST00000504807 C1orf109Q9NX04 203 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 MKS1Q9NXB0 559 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 ZNF337Q9Y3M9 751 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 OR10H1Q9Y4A9 318 aa11.86□□□□□ -0.51
DDX41-204ENST00000504807 CCDC151A5D8V7 595 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 PIP5K1BO14986 540 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 COQ9O75208 318 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 CRCPO75575 148 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 RCBTB2O95199 551 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 UTS2O95399 124 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 IL33O95760 270 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 GABRA3P34903 492 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 GSTM5P46439 218 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 CYP27C1Q4G0S4 372 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
DDX41-204ENST00000504807 EXOSC6Q5RKV6 272 aaKnown RBP11.85□□□□□ -0.51
DDX41-204ENST00000504807 VWA1Q6PCB0 445 aa11.85□□□□□ -0.51
DDX41-204ENST00000504807 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms