RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OXSR1O95747 527 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ALPLP05186 524 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PYCR1P32322 319 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 TRMT12Q53H54 448 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 HMBOX1Q6NT76 420 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 TBPL2Q6SJ96 375 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 OR8K3Q8NH51 312 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 COQ8BQ96D53 544 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PINK1Q9BXM7 581 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 SEMA6CQ9H3T2 930 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PLEKHA1Q9HB21 404 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PAIP2BQ9ULR5 123 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 NRG2O14511 850 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PRKNO60260 465 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 KHDRBS3O75525 346 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 JRKO75564 520 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 MNDAP41218 407 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 DSG2Q14126 1118 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 NR0B2Q15466 257 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 SPHARQ15513 63 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PTRH1Q86Y79 214 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ADAMTS18Q8TE60 1221 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM234Q8WY98 164 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ANXA2P2A6NMY6 339 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 H3BML4 177 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 K7EQS6 105 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 RAB36O95755 333 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ANXA2P07355 339 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 SOX2P48431 317 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 RORCP51449 518 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 GPR143P51810 404 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 MEDAGQ5VYS4 303 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ATCAYQ86WG3 371 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ANKRD53Q8N9V6 530 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 ELP4Q96EB1 424 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.29
TCOF1-207ENST00000504761 PTRH2Q9Y3E5 179 aaKnown RBP13.21□□□□□ -0.29
TCOF1-207ENST00000504761 FAM183AA6NL82 134 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 WWP2O00308 870 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 TP53I11O14683 189 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 MAGEB3O15480 346 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 CD2P06729 351 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 SLC6A9P48067 706 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 ENTPD1P49961 510 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 KCNJ10P78508 379 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 FRMPD2BQ6IN97 320 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 PPP1R3BQ86XI6 285 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 RBM45Q8IUH3 476 aaKnown RBP13.21□□□□□ -0.3
TCOF1-207ENST00000504761 CPOQ8IVL8 374 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 MSANTD3Q96H12 275 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 FUNDC2Q9BWH2 189 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 NRSN2Q9GZP1 204 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 APC2O95996 2303 aa13.21□□□□□ -0.3
TCOF1-207ENST00000504761 PGCP20142 388 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 C21orf33P30042 268 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 GFERP55789 205 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 ZNF791Q3KP31 576 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 ENTPD8Q5MY95 495 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 MRPL2Q5T653 305 aaKnown RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TP53I13Q8NBR0 393 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 NEURL3Q96EH8 262 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 OR6C1Q96RD1 312 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 LHPPQ9H008 270 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 MRPL39Q9NYK5 338 aaKnown RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 CCRL2O00421 344 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 FCER2P06734 321 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 ACVR1BP36896 505 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 NCS1P62166 190 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
TCOF1-207ENST00000504761 QPRTQ15274 297 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TLDC1Q6P9B6 456 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 PLET1Q6UQ28 207 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 NLRP8Q86W28 1048 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 CHST4Q8NCG5 386 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TMEM239Q8WW34 195 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TSC22D4Q9Y3Q8 395 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 UTRNP46939 3433 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 GXYLT2A0PJZ3 443 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 MBTPS2O43462 519 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 IDH3BO43837 385 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 MTNR1AP48039 350 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 HSD11B2P80365 405 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 RHAGQ02094 409 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 KRT77Q7Z794 578 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 NAT6Q93015 286 aa13.2□□□□□ -0.3
TCOF1-207ENST00000504761 OR1F2PQ96R84 312 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms