RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CNIH4Q9P003 139 aa15.62■□□□□ 0.09
PCDHA1-203ENST00000504120 INTS6Q9UL03 887 aaKnown RBP15.62■□□□□ 0.09
PCDHA1-203ENST00000504120 HIF3AQ9Y2N7 669 aa15.62■□□□□ 0.09
PCDHA1-203ENST00000504120 ASB4Q9Y574 426 aa15.62■□□□□ 0.09
PCDHA1-203ENST00000504120 GABRR3A8MPY1 467 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 FTCDNL1E5RQL4 147 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 FBP2O00757 339 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ADAMTS4O75173 837 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 TIMP2P16035 220 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 HOXB9P17482 250 aaPredicted RBP15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 DSC1Q08554 894 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 PARS2Q7L3T8 475 aaKnown RBP15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 IL20RAQ9UHF4 553 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 MAST2Q6P0Q8 1798 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 MROH6A6NGR9 719 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 VWA5B2Q8N398 1253 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 PRRC1Q96M27 445 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 CLMPQ9H6B4 373 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 CWH43Q9H720 699 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 IFNA2P01563 188 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 GCAP28676 217 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 CDK3Q00526 305 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 TMEM239Q8WW34 195 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 TPSD1Q9BZJ3 242 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ARL6Q9H0F7 186 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 PAQR5Q9NXK6 330 aaPredicted RBP15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 H3BMQ9 156 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 DNAJB6O75190 326 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 IFNA5P01569 189 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ARSAP15289 507 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 CEBPBP17676 345 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 AOAHP28039 575 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 CRABP1P29762 137 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ADRA1AP35348 466 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 P2RY2P41231 377 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 POU3F4P49335 361 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ARF3P61204 181 aaPredicted RBP15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ARF1P84077 181 aaKnown RBP15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 TCEAL4Q96EI5 215 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 KLHL15Q96M94 604 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 COG8Q96MW5 612 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 ZNF442Q9H7R0 627 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 HCFC1R1Q9NWW0 138 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 PRSS21Q9Y6M0 314 aa15.61■□□□□ 0.09
PCDHA1-203ENST00000504120 OR52A4PA6NMU1 304 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 MEN1O00255 615 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 BCAS1O75363 584 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 UBL4AP11441 157 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 HTR2AP28223 471 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 FAM205BPQ63HN1 556 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 CCDC28AQ8IWP9 274 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 TRMT10AQ8TBZ6 339 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 SFXN5Q8TD22 340 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 TCEAL3Q969E4 200 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 EVA1AQ9H8M9 152 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 NLKQ9UBE8 527 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 HMGN2P05204 90 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ITGAMP11215 1152 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ZNF43P17038 809 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 MAP4K2Q12851 820 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ZNF611Q8N823 705 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ASB11Q8WXH4 323 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ASB15Q8WXK1 588 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 C3orf30Q96M34 536 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 MRI1Q9BV20 369 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ENPP5Q9UJA9 477 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ICKQ9UPZ9 632 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 KIR2DS5A0A0G2JLQ3 304 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 A0A0G2JNG1 304 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 KIR2DS3K7RE56 304 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 E2F3O00716 465 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 NR0B1P51843 470 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 KIR2DS5Q14953 304 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 C6orf132Q5T0Z8 1188 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 NCCRP1Q6ZVX7 275 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ASB12Q8WXK4 309 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ATXN7L1Q9ULK2 861 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 H7C2Y5 167 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 TOXO94900 526 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 NUDT1P36639 197 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 PRLHRP49683 370 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 TAZQ16635 292 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 CTSL3PQ5NE16 218 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 ZNF761Q86XN6 746 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 OR52E1Q8NGJ3 308 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 OR6C2Q9NZP2 312 aa15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 GOLGA4Q13439 2230 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-203ENST00000504120 A6NIZ1 184 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 CA3P07451 260 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 GJA5P36382 358 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 PRKXP51817 358 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 RAP1BP61224 184 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 RAP1AP62834 184 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 CCDC58Q4VC31 144 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 C3P1Q6ZMU1 363 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 RAB11FIP2Q7L804 512 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 GPR149Q86SP6 731 aa15.59■□□□□ 0.09
PCDHA1-203ENST00000504120 C7orf34Q96L11 122 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms