RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 MED30Q96HR3 178 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 ZSWIM3Q96MP5 696 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 ACTRT3Q9BYD9 372 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 ATG4BQ9Y4P1 393 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 HCFC2Q9Y5Z7 792 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 CLCA3PQ9Y6N3 262 aa14.01□□□□□ -0.17
SNF8-203ENST00000504000 SMIM30A4D0T7 59 aa14□□□□□ -0.17
SNF8-203ENST00000504000 PRRT4C9JH25 899 aa14□□□□□ -0.17
SNF8-203ENST00000504000 PGRMC2O15173 223 aa14□□□□□ -0.17
SNF8-203ENST00000504000 PPM1DO15297 605 aa14□□□□□ -0.17
SNF8-203ENST00000504000 RNF13O43567 381 aa14□□□□□ -0.17
SNF8-203ENST00000504000 CPNE3O75131 537 aaKnown RBP14□□□□□ -0.17
SNF8-203ENST00000504000 ERAL1O75616 437 aaKnown RBP14□□□□□ -0.17
SNF8-203ENST00000504000 HNRNPA1P09651 372 aaKnown RBP eCLIP14□□□□□ -0.17
SNF8-203ENST00000504000 ELK1P19419 428 aa14□□□□□ -0.17
SNF8-203ENST00000504000 TRHRP34981 398 aaPredicted RBP14□□□□□ -0.17
SNF8-203ENST00000504000 MAP4K2Q12851 820 aa14□□□□□ -0.17
SNF8-203ENST00000504000 AGERQ15109 404 aa14□□□□□ -0.17
SNF8-203ENST00000504000 FNDC3BQ53EP0 1204 aaKnown RBP14□□□□□ -0.17
SNF8-203ENST00000504000 PLA1AQ53H76 456 aa14□□□□□ -0.17
SNF8-203ENST00000504000 PIP5KL1Q5T9C9 394 aa14□□□□□ -0.17
SNF8-203ENST00000504000 LAMTOR1Q6IAA8 161 aa14□□□□□ -0.17
SNF8-203ENST00000504000 TMEM107Q6UX40 140 aa14□□□□□ -0.17
SNF8-203ENST00000504000 C12orf40Q86WS4 652 aa14□□□□□ -0.17
SNF8-203ENST00000504000 VRK2Q86Y07 508 aa14□□□□□ -0.17
SNF8-203ENST00000504000 CCDC116Q8IYX3 515 aa14□□□□□ -0.17
SNF8-203ENST00000504000 CADM2Q8N3J6 435 aa14□□□□□ -0.17
SNF8-203ENST00000504000 MRPL43Q8N983 215 aaKnown RBP14□□□□□ -0.17
SNF8-203ENST00000504000 NUP43Q8NFH3 380 aa14□□□□□ -0.17
SNF8-203ENST00000504000 ZNF681Q96N22 645 aa14□□□□□ -0.17
SNF8-203ENST00000504000 YIPF4Q9BSR8 244 aa14□□□□□ -0.17
SNF8-203ENST00000504000 PTTG3PQ9NZH4 202 aa14□□□□□ -0.17
SNF8-203ENST00000504000 GPR55Q9Y2T6 319 aaPredicted RBP14□□□□□ -0.17
SNF8-203ENST00000504000 KCNE3Q9Y6H6 103 aa14□□□□□ -0.17
SNF8-203ENST00000504000 MUC22E2RYF6 1773 aaPredicted RBP14□□□□□ -0.17
SNF8-203ENST00000504000 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CPSF4LA6NMK7 179 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 WASHC1A8K0Z3 465 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 ISM1B1AKI9 464 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 AIFM1O95831 613 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PKLRP30613 574 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 NUDT1P36639 197 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 TALDO1P37837 337 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 HTR2BP41595 481 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CLCNKAP51800 687 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 P2RX3P56373 397 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CTBP2P56545 445 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 RGS8P57771 180 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 ERVK-21P61565 698 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 GPLD1P80108 840 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 MLLT1Q03111 559 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 MRPL28Q13084 256 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 C6orf132Q5T0Z8 1188 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CCNJQ5T5M9 372 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 SMARCD3Q6STE5 483 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 GDF7Q7Z4P5 450 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 OAFQ86UD1 273 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 RNF113BQ8IZP6 322 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 NXPE3Q969Y0 559 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 GIMAP5Q96F15 307 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 SLC41A3Q96GZ6 507 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 DEFB118Q96PH6 123 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 NRTNQ99748 197 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PRR14Q9BWN1 585 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 TEX101Q9BY14 249 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 QRSL1Q9H0R6 528 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 IRF2BPLQ9H1B7 796 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PIGUQ9H490 435 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 KLHL31Q9H511 634 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 MTHFD2LQ9H903 347 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 MCUBQ9NWR8 336 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 EXTL2Q9UBQ6 330 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 NOTCH4Q99466 2003 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 A0A0G2JN53 185 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 C7orf66A4D0T2 115 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 C1QTNF3-AMACRE9PGA6 284 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 ERI3O43414 337 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 PRICKLE3O43900 615 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 NCR1O76036 304 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 SERPIND1P05546 499 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 ALPPL2P10696 532 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PAICSP22234 425 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 ATP6V1E1P36543 226 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 BCL6P41182 706 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 P2RY2P41231 377 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 DUSP2Q05923 314 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 ZNF791Q3KP31 576 aaPredicted RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 HSD17B12Q53GQ0 312 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CDC73Q6P1J9 531 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 PLEKHM3Q6ZWE6 761 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 CXXC5Q7LFL8 322 aaKnown RBP13.99□□□□□ -0.17
SNF8-203ENST00000504000 ADGRD2Q7Z7M1 963 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 KLBQ86Z14 1044 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 NKAIN4Q8IVV8 208 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 NRMQ8IXM6 262 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 GANCQ8TET4 914 aa13.99□□□□□ -0.17
SNF8-203ENST00000504000 SNAPC3Q92966 411 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms