RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CLIP3Q96DZ5 547 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 LOXL4Q96JB6 756 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 VSTM2LQ96N03 204 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 MUS81Q96NY9 551 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 SDF2Q99470 211 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 FEVQ99581 238 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 APOL4Q9BPW4 351 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 FNDC11Q9BVV2 318 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 RSPO3Q9BXY4 272 aaPredicted RBP7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 OR10A5Q9H207 317 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 CTPS2Q9NRF8 586 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 PLSCR2Q9NRY7 297 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 ACER3Q9NUN7 267 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 C14orf105Q9NVL8 296 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 PRODH2Q9UF12 536 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 BLOC1S6Q9UL45 172 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 A4GNTQ9UNA3 340 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 OR10H1Q9Y4A9 318 aa7.5□□□□□ -1.21
PDZRN3-212ENST00000498048 PCSK5Q92824 1860 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 TCRBV16S1A1N1A0A5B0 115 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 LNP1A1A4G5 178 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 DPPA5A6NC42 116 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 AGAP5A6NIR3 686 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 EFCAB7A8K855 629 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 A8MUA0 341 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 PEX12O00623 359 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 FFAR1O14842 300 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 PCDH17O14917 1159 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 SLC16A6O15403 523 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 OR10H3O60404 316 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 BRINP1O60477 761 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 FCMRO60667 390 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 SEMA7AO75326 666 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 SOX30O94993 753 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 KCNK2O95069 426 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 TIAF1O95411 115 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 CLPTM1O96005 669 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 CLPSP04118 112 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 HBQ1P09105 142 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 S1PR1P21453 382 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 ELK4P28324 431 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 CSTF2P33240 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 CLK3P49761 638 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 GABARAPL2P60520 117 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 EEF1A1P68104 462 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 PSG6Q00889 435 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 FUT7Q11130 342 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 NPRL3Q12980 569 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 TRA2AQ13595 282 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 RBM48Q5RL73 367 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 MRPL2Q5T653 305 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 BMP8AQ7Z5Y6 402 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 PPP1R3BQ86XI6 285 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 C7orf57Q8NEG2 295 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 OR7G1Q8NGA0 311 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 C16orf52Q8NHV5 167 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 FAM81AQ8TBF8 368 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 SLC2A12Q8TD20 617 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 HDAC2Q92769 488 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 MCHR1Q99705 422 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 NIPSNAP1Q9BPW8 284 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 WFDC6Q9BQY6 131 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 OR8D2Q9GZM6 311 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 VN1R1Q9GZP7 353 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 ARMC7Q9H6L4 198 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 RLIMQ9NVW2 624 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 COPS7AQ9UBW8 275 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 TESQ9UGI8 421 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 ZNF232Q9UNY5 417 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 MGAT4BQ9UQ53 548 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 CFL2Q9Y281 166 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 GPR55Q9Y2T6 319 aaPredicted RBP7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 HCN4Q9Y3Q4 1203 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 PCDHGB2Q9Y5G2 931 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 R4GN57 208 aa7.49□□□□□ -1.21
PDZRN3-212ENST00000498048 A0A087WXM4 84 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 A0A1W2PRQ8 180 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 SH3PXD2BA1X283 911 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 FAM86C2PA6NEL3 165 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 A6NHS1 94 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 CLDN24A6NM45 220 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 SLC1A7O00341 560 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 NTN3O00634 580 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 POLR1CO15160 346 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 OR5F1O95221 314 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 LDOC1O95751 146 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 ANGPTL1O95841 491 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 GP1BAP07359 652 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 POU2F1P14859 743 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 FUT4P22083 530 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 RNF144AP50876 292 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 PSMD4P55036 377 aaKnown RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 CDH15P55291 814 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 OCA2Q04671 838 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 CD47Q08722 323 aa7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 TOP3AQ13472 1001 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-212ENST00000498048 PIN1Q13526 163 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms