RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TNNI1P19237 187 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 BCL3P20749 454 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 PTMSP20962 102 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 MSNP26038 577 aaKnown RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 ADORA2BP29275 332 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 GTF2H1P32780 548 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 KHKP50053 298 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 NDST1P52848 882 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ACLYP53396 1101 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 DEFB103AP81534 67 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 CBX1P83916 185 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ACY1Q03154 408 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 RBBP4Q09028 425 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 KLHL30Q0D2K2 578 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 GPR50Q13585 617 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SNX1Q13596 522 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 IHHQ14623 411 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 MESDQ14696 234 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ZBTB6Q15916 424 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 C3AR1Q16581 482 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ECSCRQ19T08 205 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 LRRC26Q2I0M4 334 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 RFTN2Q52LD8 501 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 CLLU1OSQ5K130 101 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 TEX35Q5T0J7 233 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 C9orf66Q5T8R8 295 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ATF7IP2Q5U623 682 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 AGAP7PQ5VUJ5 663 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SYPL2Q5VXT5 272 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 WSCD1Q658N2 575 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SEL1L3Q68CR1 1132 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ZNF776Q68DI1 518 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 TTC19Q6DKK2 380 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 PMF1Q6P1K2 205 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 TMEM270Q6UE05 265 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ALKAL1Q6UXT8 129 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 CEACAM19Q7Z692 300 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 RPAINQ86UA6 219 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 HPS6Q86YV9 775 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 FGFRL1Q8N441 504 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SMYD1Q8NB12 490 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 NEK11Q8NG66 645 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 NAT14Q8WUY8 206 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 C1orf54Q8WWF1 131 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SEPT8Q92599 483 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ATP6V0A1Q93050 837 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 NABP1Q96AH0 204 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 CYP2S1Q96SQ9 504 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 C11orf70Q9BRQ4 267 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 MLPHQ9BV36 600 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 NT5C3AQ9H0P0 336 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SP140LQ9H930 580 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 PLEKHA3Q9HB20 300 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 NRBP2Q9NSY0 501 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 DEPPQ9NTK1 212 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 FAM120CQ9NX05 1096 aaKnown RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 RBAKQ9NYW8 714 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 THYN1Q9P016 225 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ARMCX3Q9UH62 379 aaPredicted RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 XPO7Q9UIA9 1087 aaKnown RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 CDH7Q9ULB5 785 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 TP53TG3Q9ULZ0 132 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 GPR132Q9UNW8 380 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 TMED7Q9Y3B3 224 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 SETXQ7Z333 2677 aaKnown RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 A0A0C4DFX4 3053 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 ANAPC1Q9H1A4 1944 aa2.25□□□□□ -2.05
RIF1-212ENST00000498041 MTCL1Q9Y4B5 1905 aaKnown RBP2.25□□□□□ -2.05
RIF1-212ENST00000498041 MYO16Q9Y6X6 1858 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 CROCCQ5TZA2 2017 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SYNJ2BP-COX16A0A087WUM0 186 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SMIM28A0A1B0GU29 152 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 A0A1B0GUA9 196 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 BCLAF3A2AJT9 711 aaKnown RBP2.24□□□□□ -2.05
RIF1-212ENST00000498041 CCDC162PA2VCL2 907 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 ZNF233A6NK53 670 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SDR42E2A6NKP2 422 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 ANHXE9PGG2 379 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 TRDMT1O14717 391 aaKnown RBP2.24□□□□□ -2.05
RIF1-212ENST00000498041 SH3BGRLO75368 114 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SLU7O95391 586 aaKnown RBP2.24□□□□□ -2.05
RIF1-212ENST00000498041 CLTAP09496 248 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 EPB41P11171 864 aaKnown RBP2.24□□□□□ -2.05
RIF1-212ENST00000498041 CCL5P13501 91 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 CD1EP15812 388 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 GAP43P17677 238 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 ACKR3P25106 362 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 DNAJB1P25685 340 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 CASQ1P31415 396 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SFNP31947 248 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 NAMPTP43490 491 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 GSK3BP49841 420 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 ARPP19P56211 112 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 VSNL1P62760 191 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 FKBP1BP68106 108 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 SEMG2Q02383 582 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 EXOC3L4Q17RC7 722 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 POM121L1PQ3SYA9 428 aa2.24□□□□□ -2.05
RIF1-212ENST00000498041 PTPN20Q4JDL3 420 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms