RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 STX11O75558 287 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 H6PDO95479 791 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 AK1P00568 194 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 CHRM4P08173 479 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 TFPTP0C1Z6 253 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 GPX2P18283 190 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 NME2P22392 152 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 CALB2P22676 271 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 MAGEA8P43361 318 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 DNASE1L1P49184 302 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 MNAT1P51948 309 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 SLC7A2P52569 658 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 PSME3P61289 254 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 KCNJ2P63252 427 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 RPP38P78345 283 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 TXNL4AP83876 142 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 SLC25A3Q00325 362 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.92□□□□□ -0.664e-6■■□□□ 11.4
CUX1-210ENST00000497815 GRAMD1BQ3KR37 738 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 RPS26P11Q5JNZ5 115 aaPredicted RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 HEPHL1Q6MZM0 1159 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 HACD2Q6Y1H2 254 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 IFNEQ86WN2 208 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 FBXW8Q8N3Y1 598 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 ZNF614Q8N883 585 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 TEX19Q8NA77 164 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 TMEM178AQ8NBL3 297 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 OR8J3Q8NGG0 315 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 OR4C3Q8NH37 302 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 OR10A6Q8NH74 314 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 NFKBIDQ8NI38 313 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 PAQR8Q8TEZ7 354 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 SLC38A5Q8WUX1 472 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 WBP1Q96G27 269 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 ECSITQ9BQ95 431 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 GPATCH1Q9BRR8 931 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 KAT8Q9H7Z6 458 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 GALNT9Q9HCQ5 603 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 SH2D2AQ9NP31 389 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 A4GALTQ9NPC4 353 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 DEPPQ9NTK1 212 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 CMTM6Q9NX76 183 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 THUMPD1Q9NXG2 353 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 KLRF1Q9NZS2 232 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 GMPR2Q9P2T1 348 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 CNOT11Q9UKZ1 510 aaKnown RBP10.92□□□□□ -0.66
CUX1-210ENST00000497815 LIPT1Q9Y234 373 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 WDR45Q9Y484 360 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 GMEB1Q9Y692 573 aa10.92□□□□□ -0.66
CUX1-210ENST00000497815 C15orf38-AP3S2A0A0A6YYH1 394 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 C5orf58C9J3I9 102 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 CDK2AP1O14519 115 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 PEX1O43933 1283 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 ZIC2O95409 532 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 T-ENOLP0DO92 83 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 HPGDP15428 266 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 RFC3P40938 356 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 CASP3P42574 277 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 PMP22Q01453 160 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 CHRNEQ04844 493 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 KLRB1Q12918 225 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 NFATC3Q12968 1075 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 MAPK11Q15759 364 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 TYW3Q6IPR3 259 aaKnown RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 C8orf82Q6P1X6 216 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 RINLQ6ZS11 566 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 ARPINQ7Z6K5 226 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 MARCH3Q86UD3 253 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 SULF2Q8IWU5 870 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 GATSQ8NAP1 163 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 GRHL3Q8TE85 626 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 SCMH1Q96GD3 660 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 TMEM19Q96HH6 336 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 JSRP1Q96MG2 331 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 TRNT1Q96Q11 434 aaKnown RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 HOPXQ9BPY8 73 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 DOHHQ9BU89 302 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 OSBPL11Q9BXB4 747 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 ZNF350Q9GZX5 532 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 QRSL1Q9H0R6 528 aaKnown RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 RUBCNLQ9H714 662 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 ADA2Q9NZK5 511 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 CNIH4Q9P003 139 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 USP22Q9UPT9 525 aa10.91□□□□□ -0.66
CUX1-210ENST00000497815 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
CUX1-210ENST00000497815 PINLYPA6NC86 204 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 C17orf51A8MQB3 221 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 NME4O00746 187 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 SCDO00767 359 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 OXSR1O95747 527 aaPredicted RBP10.9□□□□□ -0.66
CUX1-210ENST00000497815 ARAFP10398 606 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 BMP2P12643 396 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 CNR1P21554 472 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 AQP1P29972 269 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 EVI2BP34910 448 aa10.9□□□□□ -0.66
CUX1-210ENST00000497815 DCTP40126 519 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms