RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 BMP8AQ7Z5Y6 402 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 THOC6Q86W42 341 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 HORMAD2Q8N7B1 307 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 OR52B4Q8NGK2 314 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC38A5Q8WUX1 472 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ACOT12Q8WYK0 555 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 KCNK12Q9HB15 430 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TRBV23-1A0A0A0MS06 115 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRN3E7EW58 273 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CHST10O43529 356 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 FRS3O43559 492 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 KLK1P06870 262 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 PTHLHP12272 177 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 S100A11P31949 105 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 GDNFP39905 211 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SERTAD2Q14140 314 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SMARCD3Q6STE5 483 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SMAP2Q8WU79 429 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CHFRQ96EP1 664 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 HHIPQ96QV1 700 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CRB3Q9BUF7 120 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SCML2Q9UQR0 700 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 GPR31O00270 319 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 RNASET2O00584 256 aaKnown RBP12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 SIGLEC6O43699 453 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 RLN2P04090 185 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 MRPL3P09001 348 aaKnown RBP12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 FGF2P09038 288 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 KCNJ3P48549 501 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 TNFRSF17Q02223 184 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC27A4Q6P1M0 643 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 TMUB2Q71RG4 321 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 THAP4Q8WY91 577 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 GKN1Q9NS71 199 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 PADI3Q9ULW8 664 aa12.27□□□□□ -0.44
GAPVD1-220ENST00000497580 MCRIP1C9JLW8 97 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 SSX5O60225 188 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 SUSD5O60279 629 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 FMO6PO60774 539 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 OR5F1O95221 314 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC2A10O95528 541 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 F2P00734 622 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 AHRP35869 848 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 FGL1Q08830 312 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 GSG1LQ6UXU4 331 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 NXPE1Q8N323 547 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 OR10H4Q8NGA5 316 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 ING5Q8WYH8 240 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 YIPF4Q9BSR8 244 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 FAIM2Q9BWQ8 316 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 OR51I1Q9H343 314 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 MED11Q9P086 117 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 SIRT4Q9Y6E7 314 aaPredicted RBP12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 OR2AG2A6NM03 316 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 AGAP14A8MT82 685 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 SOCS6O14544 535 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 KDELR3O43731 214 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 PAICSP22234 425 aaKnown RBP12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 HAAOP46952 286 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 PRKAG1P54619 331 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 CAMK1Q14012 370 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 CCSMST1Q4G0I0 132 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 GGTA1PQ4G0N0 100 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 CDC73Q6P1J9 531 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 OR10K1Q8NGX5 313 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 ARMC5Q96C12 935 aa12.27□□□□□ -0.45
GAPVD1-220ENST00000497580 H7C0S8 307 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 GAPDHSO14556 408 aaPredicted RBP12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 RNF13O43567 381 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 RLN1P04808 185 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 CBSLP0DN79 551 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 NPR2P20594 1047 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 PBLDP30039 288 aaPredicted RBP12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 CBSP35520 551 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 MAPK9P45984 424 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 STARP49675 285 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 PFN3P60673 137 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 LTB4RQ15722 352 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 MINDY4Q4G0A6 757 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 RPTNQ6XPR3 784 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 COMMD6Q7Z4G1 85 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 OR1S1Q8NH92 325 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 NSMAFQ92636 917 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms