RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
VPS26A-209ENST00000497564 V9GYQ6 96 aa13.13□□□□□ -0.31
VPS26A-209ENST00000497564 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
VPS26A-209ENST00000497564 SPTA1P02549 2419 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 FRG2CA6NGY1 282 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 C21orf140B9A014 251 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 TERTO14746 1132 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ATXN7O15265 892 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 KIAA0513O60268 411 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 STX11O75558 287 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 TIPRLO75663 272 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 C1QL1O75973 258 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 KCNK2O95069 426 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 OPN1SWP03999 348 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 DRD5P21918 477 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 RPS4Y1P22090 263 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 F8A1P23610 371 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 FOLR3P41439 243 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 KCNJ5P48544 419 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 KCNJ10P78508 379 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 CHRNEQ04844 493 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 EBPQ15125 230 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ATP6AP1Q15904 470 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 NLGN4XQ8N0W4 816 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF619Q8N2I2 560 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF441Q8N8Z8 693 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 NLGN4YQ8NFZ3 816 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 LRTOMTQ8WZ04 291 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 PIK3R3Q92569 461 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ADIPOR1Q96A54 375 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 GPR87Q9BY21 358 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
VPS26A-209ENST00000497564 GCN1Q92616 2671 aaKnown RBP13.12□□□□□ -0.31
VPS26A-209ENST00000497564 SYT5O00445 386 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 TO15178 435 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 DPM1O60762 260 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 PRSS23O95084 383 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 ALPPP05187 535 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 TCN2P20062 427 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 MMP11P24347 488 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 PIGAP37287 484 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 STAT5AP42229 794 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 SLC26A5P58743 744 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 LY6DQ14210 128 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 PCOLCEQ15113 449 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 DUSP7Q16829 419 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 DHRS4L2Q6PKH6 230 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 APCDD1LQ8NCL9 501 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 EXTL1Q92935 676 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 LCORQ96JN0 433 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 C7orf34Q96L11 122 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 WWTR1Q9GZV5 400 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 TCFL5Q9UL49 500 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 MRPS18BQ9Y676 258 aaKnown RBP13.11□□□□□ -0.31
VPS26A-209ENST00000497564 HEATR5AQ86XA9 2040 aa13.11□□□□□ -0.31
VPS26A-209ENST00000497564 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 IGHV3-20A0A0C4DH32 117 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 C2orf92A0A1B0GVN3 265 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ERVH48-1M5A8F1 160 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 ACOX3O15254 700 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 NKX2-8O15522 239 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 FCMRO60667 390 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 LDLRP01130 860 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 FABP3P05413 133 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 FESP07332 822 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 THBS1P07996 1170 aa13.1□□□□□ -0.31
VPS26A-209ENST00000497564 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
VPS26A-209ENST00000497564 LCN1P31025 176 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms