RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 KRT73Q86Y46 540 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 CMIPQ8IY22 773 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 ZNF619Q8N2I2 560 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 ZNF527Q8NB42 609 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 OR4N2Q8NGD1 307 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 PAQR8Q8TEZ7 354 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 RASSF5Q8WWW0 418 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 HGDQ93099 445 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 SLC35B4Q969S0 331 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 ZNF607Q96SK3 696 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 KCTD14Q9BQ13 255 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 TREX2Q9BQ50 279 aaPredicted RBP18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 UTP23Q9BRU9 249 aaKnown RBP18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 GORASP2Q9H8Y8 452 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 HPF1Q9NWY4 346 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 IFT52Q9Y366 437 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 CPAMD8Q8IZJ3 1885 aa18.17■□□□□ 0.5
SCAMP3-209ENST00000497470 C5orf58C9J3I9 102 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 SERPINB7O75635 380 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 H6PDO95479 791 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 THBS1P07996 1170 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 NUDT7P0C024 238 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 RPS4Y1P22090 263 aaKnown RBP18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 SOX3P41225 446 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 CXADRP78310 365 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 CEACAM7Q14002 265 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 SYPL1Q16563 259 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 TYW3Q6IPR3 259 aaKnown RBP18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 FRRS1Q6ZNA5 592 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 WDR53Q7Z5U6 358 aaPredicted RBP18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 MISPQ8IVT2 679 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 FBXW8Q8N3Y1 598 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 THAP3Q8WTV1 239 aaPredicted RBP18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 WBP1Q96G27 269 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 TMEM19Q96HH6 336 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 RNF145Q96MT1 663 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 CADM1Q9BY67 442 aaKnown RBP18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 MAGEL2Q9UJ55 1249 aa18.16■□□□□ 0.5
SCAMP3-209ENST00000497470 OR5H15A6NDH6 313 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 AGAP5A6NIR3 686 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ALG1L2C9J202 215 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 MASP2O00187 686 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 SLC28A2O43868 658 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ZNF354AO60765 605 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 NME6O75414 186 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 IGKV1D-16P01601 117 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 BCHEP06276 602 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 CHRM4P08173 479 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 SFTPCP11686 197 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 HOXB6P17509 224 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 PGM1P36871 562 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 TRIM25Q14258 630 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 GPAT3Q53EU6 434 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 MTX3Q5HYI7 312 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 B3GNTL1Q67FW5 361 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 BEST3Q8N1M1 668 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ANKFN1Q8N957 763 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 SPPL2AQ8TCT8 520 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 MCUR1Q96AQ8 359 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ASB9Q96DX5 294 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 FRMD6Q96NE9 622 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 THTPAQ9BU02 230 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ACTR3BQ9P1U1 418 aa18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 GPC6Q9Y625 555 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 ANKRD11Q6UB99 2663 aaPredicted RBP18.15■□□□□ 0.5
SCAMP3-209ENST00000497470 UGT2B11O75310 529 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 GMNNO75496 209 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 OR6B1O95007 311 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 DBIP07108 87 aaKnown RBP18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 GGT1P19440 569 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 CD96P40200 585 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 CLK3P49761 638 aaKnown RBP18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 CASP9P55211 416 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 TUBA3CQ13748 450 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 FLYWCH1Q4VC44 716 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 SLC22A10Q63ZE4 541 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 SLC30A6Q6NXT4 461 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 TUBA3EQ6PEY2 450 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 EID3Q8N140 333 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 FBXO30Q8TB52 745 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 ADOQ96SZ5 270 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 TRIM8Q9BZR9 551 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 ARMC7Q9H6L4 198 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 CACYBPQ9HB71 228 aaKnown RBP18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 TIMMDC1Q9NPL8 285 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 ZNF232Q9UNY5 417 aa18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 CHCHD2Q9Y6H1 151 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.14■□□□□ 0.49
SCAMP3-209ENST00000497470 FADS1O60427 444 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 MAN1A2O60476 641 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 FCMRO60667 390 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 SNX4O95219 450 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 WDPCPO95876 746 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 C8BP07358 591 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 CYP4B1P13584 511 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 KDELR2P33947 212 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 POLE2P56282 527 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 CHRNEQ04844 493 aa18.13■□□□□ 0.49
SCAMP3-209ENST00000497470 NNATQ16517 81 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms