RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	CT45A2	Q5DJT8	189 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF628	Q5EBL2	1059 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	TTC19	Q6DKK2	380 aa	Predicted RBP	7.01	□□□□□ -1.29
NVL-223	ENST00000496393	ADAM5	Q6NVV9	412 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	IL17REL	Q6ZVW7	336 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	COMMD6	Q7Z4G1	85 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	PPM1N	Q8N819	430 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	FADS6	Q8N9I5	356 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	OR6K3	Q8NGY3	331 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	PYROXD1	Q8WU10	500 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	SMAP2	Q8WU79	429 aa	Predicted RBP	7.01	□□□□□ -1.29
NVL-223	ENST00000496393	CDKL2	Q92772	493 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	GFM2	Q969S9	779 aa	Known RBP	7.01	□□□□□ -1.29
NVL-223	ENST00000496393	ATP6V1E2	Q96A05	226 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	DTNBP1	Q96EV8	351 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	BTBD9	Q96Q07	612 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	HBEGF	Q99075	208 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	TACO1	Q9BSH4	297 aa	Known RBP	7.01	□□□□□ -1.29
NVL-223	ENST00000496393	RTN4R	Q9BZR6	473 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	AMBRA1	Q9C0C7	1298 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	TMEM185B	Q9H7F4	350 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	NOL11	Q9H8H0	719 aa	Known RBP	7.01	□□□□□ -1.29
NVL-223	ENST00000496393	SAYSD1	Q9NPB0	183 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	RNF14	Q9UBS8	474 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	SLC12A4	Q9UP95	1085 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	SNX24	Q9Y343	169 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	OR10H1	Q9Y4A9	318 aa		7.01	□□□□□ -1.29
NVL-223	ENST00000496393	SYCE1L	A8MT33	242 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393		E7ESA3	106 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	FOXE1	O00358	373 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	OR7A17	O14581	309 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	UGDH	O60701	494 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	TMCC2	O75069	709 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	CLDN9	O95484	217 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	ALDOA	P04075	364 aa	Known RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	CD3E	P07766	207 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	DANCR	P0C864	163 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	CTAGE8	P0CG41	777 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	FCGR2A	P12318	317 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF16	P17020	682 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	ERCC6L	Q2NKX8	1250 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	TMEM249	Q2WGJ8	235 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	FRG2	Q64ET8	278 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	PAGE2	Q7Z2X7	111 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	GGN	Q86UU5	652 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	CTAGE4	Q8IX94	777 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	CENPL	Q8N0S6	344 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	METTL4	Q8N3J2	472 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393		Q8N3U1	123 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	METTL25	Q8N6Q8	603 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	ARIH2OS	Q8N7S6	290 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	PTGR2	Q8N8N7	351 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	GBP7	Q8N8V2	638 aa	Predicted RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	L3MBTL4	Q8NA19	623 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	RNF138	Q8WVD3	245 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	HTRA1	Q92743	480 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	EXOSC8	Q96B26	276 aa	Known RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	MRRF	Q96E11	262 aa	Known RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	C1GALT1C1	Q96EU7	318 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	VSTM2L	Q96N03	204 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	FRG2B	Q96QU4	278 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	LRRC1	Q9BTT6	524 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	BEX2	Q9BXY8	128 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	ZBTB26	Q9HCK0	441 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	PLSCR4	Q9NRQ2	329 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	FARSB	Q9NSD9	589 aa	Known RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	CDC42EP3	Q9UKI2	254 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	UTS2R	Q9UKP6	389 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	SNX12	Q9UMY4	172 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	VDAC3	Q9Y277	283 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	MRPS18C	Q9Y3D5	142 aa	Known RBP	7	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF780B	Q9Y6R6	833 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	PCNX3	Q9H6A9	2034 aa		7	□□□□□ -1.29
NVL-223	ENST00000496393	ALPK2	Q86TB3	2170 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	FAM234B	A2RU67	622 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	FAM159B	A6NKW6	160 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CXCL13	O43927	109 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	SS18L1	O75177	396 aa	Predicted RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	GUCY1B2	O75343	617 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	IL32	P24001	234 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	SPR	P35270	261 aa	Predicted RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CCNG1	P51959	295 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	NUDT6	P53370	316 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	PNLIPRP2	P54317	469 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ALDH18A1	P54886	795 aa	Known RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CASP9	P55211	416 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	BSPH1	Q075Z2	132 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	GALNT1	Q10472	559 aa	Predicted RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	IFT88	Q13099	833 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	TRAF3	Q13114	568 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	TAB1	Q15750	504 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	PGGHG	Q32M88	737 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF672	Q499Z4	452 aa	Predicted RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	NCMAP	Q5T1S8	102 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	DNM1P46	Q6ZS02	220 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	RPS27L	Q71UM5	84 aa	Known RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	MARCH3	Q86UD3	253 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	STK32C	Q86UX6	486 aa		6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms