RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TAS2R3Q9NYW6 316 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 MGAT4CQ9UBM8 478 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 SLC22A7Q9Y694 548 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 DENND4AQ7Z401 1863 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 A0A1W2PRB8 838 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 SMIM30A4D0T7 59 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 OR6C75A6NL08 312 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PHYHO14832 338 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TAPBPO15533 448 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PAGE1O75459 146 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 STX11O75558 287 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 CLDN9O95484 217 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 IL5P05113 134 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 SYPP08247 313 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 C1SP09871 688 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 UBBP0CG47 229 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 UBCP0CG48 685 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 SPP1P10451 314 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ACADLP28330 430 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 PTGER3P43115 390 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 RPS27AP62979 156 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 UBA52P62987 128 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 BDH1Q02338 343 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TRAM2Q15035 370 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ANXA8L1Q5VT79 327 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ZNF660Q6AZW8 331 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 UNC5DQ6UXZ4 953 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TAC4Q86UU9 113 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TCEANCQ8N8B7 351 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ZNF485Q8NCK3 441 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 HUS1BQ8NHY5 278 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 MED10Q9BTT4 135 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 GSDMCQ9BYG8 508 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ENKD1Q9H0I2 346 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ZNF576Q9H609 170 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 TMEM38AQ9H6F2 299 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 C1GALT1Q9NS00 363 aa8.53□□□□□ -1.04
HPS4-217ENST00000496385 ZNF282Q9UDV7 671 aaPredicted RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 TSR3Q9UJK0 312 aaKnown RBP8.53□□□□□ -1.04
HPS4-217ENST00000496385 A0A1B0GTQ1 180 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 C1orf226A1L170 272 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 GREM1O60565 184 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 LINC00271P0C7V0 271 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 PTAFRP25105 342 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 PAX6P26367 422 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SLC11A1P49279 550 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 MECP2P51608 486 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 GAS1P54826 345 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 EEF1A1P68104 462 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 EEF1A2Q05639 463 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 NDUFA9Q16795 377 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SYT14P1Q58G82 188 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SFRP5Q5T4F7 317 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ARMC12Q5T9G4 340 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 EEF1A1P5Q5VTE0 462 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SLC6A19Q695T7 634 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 MOB3CQ70IA8 216 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RHOUQ7L0Q8 258 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SLC39A7Q92504 469 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 GTF3AQ92664 365 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 ABHD1Q96SE0 405 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 UTP23Q9BRU9 249 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 ARL6Q9H0F7 186 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RERGLQ9H628 205 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RNF122Q9H9V4 155 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RASL12Q9NYN1 266 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 MRTO4Q9UKD2 239 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 PCDHB1Q9Y5F3 818 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 DMRT1Q9Y5R6 373 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 VCANP13611 3396 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 KIAA1671Q9BY89 1806 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 C5orf52A6NGY3 159 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 POM121CA8CG34 1229 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 NUDT19A8MXV4 375 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 LOC730098B7Z3J9 87 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 LRRN3E7EW58 273 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 FAAHO00519 579 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 PRRG1O14668 218 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 MID1O15344 667 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 NIPSNAP2O75323 286 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 RB1P06400 928 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SFTPCP11686 197 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 AMD1P17707 334 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ATP5C1P36542 298 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 KCNJ3P48549 501 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 SMIM11AP58511 58 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 PSMA6P60900 246 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 SMAD3P84022 425 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 SF1Q15637 639 aaKnown RBP8.52□□□□□ -1.05
HPS4-217ENST00000496385 RAB30Q15771 203 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 ZSWIM7Q19AV6 140 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 TMEM44Q2T9K0 475 aa8.52□□□□□ -1.05
HPS4-217ENST00000496385 CTSL3PQ5NE16 218 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms