RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 HOXC4P09017 264 aaPredicted RBP3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 SFNP31947 248 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 POU3F4P49335 361 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 CDC37Q16543 378 aaPredicted RBP3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 PARP6Q2NL67 630 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 CCDC40Q4G0X9 1142 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 LIPKQ5VXJ0 399 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 OR6B2Q6IFH4 312 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 C9orf40Q8IXQ3 194 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 OR8H1Q8NGG4 311 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 RNF138Q8WVD3 245 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 TADA1Q96BN2 335 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 TMEM237Q96Q45 408 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 Q9H3A6 140 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 SMC3Q9UQE7 1217 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 CUX2O14529 1486 aa3.53□□□□□ -1.84
NCKAP1-208ENST00000495619 BICDL2A1A5D9 508 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 E9PMD0 336 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 SGK494L7N484 410 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 IGHV3-23P01764 117 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 IGKV3-11P04433 115 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 IGFBP1P08833 259 aaPredicted RBP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 SLC35G4P0C7Q5 338 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 CCDC192P0DO97 292 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 EMDP50402 254 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 HERVK_113P63132 956 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 ERVK-8P63133 956 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 MYBPC1Q00872 1141 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 SRYQ05066 204 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 BCL2L1Q07817 233 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 FUT7Q11130 342 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 PDIA5Q14554 519 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 CYP51A1Q16850 503 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 DCST2Q5T1A1 773 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 RAB12Q6IQ22 244 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 LEG1Q6P5S2 330 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 TIFABQ6ZNK6 161 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 PAQR9Q6ZVX9 377 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 P4HA3Q7Z4N8 544 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 PARGQ86W56 976 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 ERI1Q8IV48 349 aaKnown RBP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 MRPL43Q8N983 215 aaKnown RBP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 DQX1Q8TE96 717 aaKnown RBP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 DHTKD1Q96HY7 919 aaPredicted RBP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF285Q96NJ3 590 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 CNPY3Q9BT09 278 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 ERVK-6Q9BXR3 956 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 NMNAT2Q9BZQ4 307 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 MYOZ2Q9NPC6 264 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 FZR1Q9UM11 496 aa3.52□□□□□ -1.85
NCKAP1-208ENST00000495619 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 ADAM12O43184 909 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 ANP32DO95626 131 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 PRB2P02812 416 aaPredicted RBP3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 ZCCHC18P0CG32 403 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 ETS1P14921 441 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 IL10P22301 178 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 GABRR1P24046 479 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 AKT2P31751 481 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 CKAP4Q07065 602 aaKnown RBP3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 PSG7Q13046 419 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 WSCD1Q658N2 575 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 VPS36Q86VN1 386 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 RNF148Q8N7C7 305 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 ARL10Q8N8L6 244 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 FAM71CQ8NEG0 241 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 WDR36Q8NI36 951 aaKnown RBP3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 MCHR2Q969V1 340 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 EBF4Q9BQW3 602 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 PTGES2Q9H7Z7 377 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 FAM114A2Q9NRY5 505 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 RBM28Q9NW13 759 aaKnown RBP3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 DUS2Q9NX74 493 aaKnown RBP3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 EHFQ9NZC4 300 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 IL20RAQ9UHF4 553 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 BCAP29Q9UHQ4 241 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 NUDCQ9Y266 331 aa3.51□□□□□ -1.85
NCKAP1-208ENST00000495619 RNF103-CHMP3A0A140T963 221 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 SSX5O60225 188 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 RAMP1O60894 148 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 NDUFA7O95182 113 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 MT-ATP6P00846 226 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF853P0CG23 659 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 CYP11B1P15538 503 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 ATXN3P54252 364 aaPredicted RBP3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 SNX1Q13596 522 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 CYBRD1Q53TN4 286 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 OR5M10Q6IEU7 315 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 TMEM26Q6ZUK4 368 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 TGIF2LYQ8IUE0 185 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF619Q8N2I2 560 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 KDM8Q8N371 416 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 HDDC3Q8N4P3 179 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 OTUD6BQ8N6M0 293 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 MINDY2Q8NBR6 621 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 NCLNQ969V3 563 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms