RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 OR2M5A3KFT3 312 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 COPEO14579 308 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 PDPK1O15530 556 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 SIAH2O43255 324 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 AKAP10O43572 662 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 SEC22BO75396 215 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CRCPO75575 148 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 IL33O95760 270 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 ACP2P11117 423 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CD1EP15812 388 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CHMP24386 653 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 MAP3K8P41279 467 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 DSCR4P56555 118 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 PDE7AQ13946 482 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 DAZAP2Q15038 168 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 GRAMD1BQ3KR37 738 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CYP27C1Q4G0S4 372 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 RFTN2Q52LD8 501 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CFAP157Q5JU67 520 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 RAET1LQ5VY80 246 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 AAGABQ6PD74 315 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 GRAMD2AQ8IUY3 354 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 CCDC63Q8NA47 563 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FAM76AQ8TAV0 307 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 HOXB13Q92826 284 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 NINJ1Q92982 152 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF845Q96IR2 970 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 TSSK3Q96PN8 268 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 TM9SF2Q99805 663 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FOXC2Q99958 501 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 RBM24Q9BX46 236 aaKnown RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 PLEKHF2Q9H8W4 249 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 L2HGDHQ9H9P8 463 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 LRTM1Q9HBL6 345 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FBXO34Q9NWN3 711 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FAM120CQ9NX05 1096 aaKnown RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 BAIAP2L1Q9UHR4 511 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FOXD3Q9UJU5 478 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 ABCG2Q9UNQ0 655 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 MRPS18CQ9Y3D5 142 aaKnown RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF337Q9Y3M9 751 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 DNAJC15Q9Y5T4 150 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 DNHD1Q96M86 4753 aa10.51□□□□□ -0.73
VTI1A-208ENST00000494728 FN1P02751 2386 aaKnown RBP10.51□□□□□ -0.73
VTI1A-208ENST00000494728 DSCAMO60469 2012 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 AZIN1O14977 448 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 LSM1O15116 133 aaKnown RBP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 SEC14L5O43304 696 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 SLITRK5O94991 958 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 ATE1O95260 518 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 UTS2O95399 124 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 HRGP04196 525 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 LINC00032P0C843 101 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 EPXP11678 715 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 HK1P19367 917 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 GABRA3P34903 492 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 GCKP35557 465 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 CPOXP36551 454 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 FRKP42685 505 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 PSPHP78330 225 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 MRPS22P82650 360 aaKnown RBP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 SF3B4Q15427 424 aaKnown RBP eCLIP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 DECR1Q16698 335 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 UGT3A2Q3SY77 523 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 ZCCHC23Q6ZST2 131 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 GGNQ86UU5 652 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 EIF1ADQ8N9N8 165 aaKnown RBP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 DUSP19Q8WTR2 217 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 C1GALT1C1Q96EU7 318 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 APOPT1Q96IL0 206 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 CCT7Q99832 543 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 Q9N2J8 555 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-208ENST00000494728 C1orf109Q9NX04 203 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 SLC17A7Q9P2U7 560 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 PACSIN3Q9UKS6 424 aa10.5□□□□□ -0.73
VTI1A-208ENST00000494728 SH3D21A4FU49 640 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SLC22A20A6NK97 555 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 A8MXE2 369 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 H3BML4 177 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 PIP5K1BO14986 540 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 NKX2-2O95096 273 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 CREB1P16220 341 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 ALDH3A1P30838 453 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 PEX19P40855 299 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 CPA2P48052 419 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 CCT5P48643 541 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 RNF144AP50876 292 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 VSNL1P62760 191 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 SIRPAP78324 504 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 FOXD4Q12950 439 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 GUSBP1Q15486 140 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 DUSP5Q16690 384 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 TMEM44Q2T9K0 475 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 GALNTL6Q49A17 601 aa10.49□□□□□ -0.73
VTI1A-208ENST00000494728 EXOSC6Q5RKV6 272 aaKnown RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF474Q6S9Z5 364 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-208ENST00000494728 RNF165Q6ZSG1 346 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 337.2 ms