RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 SENP1Q9P0U3 644 aa6.05□□□□□ -1.44
SEC23B-208ENST00000494645 VPS29Q9UBQ0 182 aa6.05□□□□□ -1.44
SEC23B-208ENST00000494645 PYCARDQ9ULZ3 195 aa6.05□□□□□ -1.44
SEC23B-208ENST00000494645 SNX6Q9UNH7 406 aa6.05□□□□□ -1.44
SEC23B-208ENST00000494645 PROCRQ9UNN8 238 aa6.05□□□□□ -1.44
SEC23B-208ENST00000494645 MRPS18CQ9Y3D5 142 aaKnown RBP6.05□□□□□ -1.44
SEC23B-208ENST00000494645 ARID1AO14497 2285 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 CCDC189A1A4V9 331 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 OR2M5A3KFT3 312 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 STX16-NPEPL1H3BU86 382 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 MANBAO00462 879 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 STX16O14662 325 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 EMC8O43402 210 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 PCDH7O60245 1069 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 BCAS2O75934 225 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 OTCP00480 354 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 PLGP00747 810 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GPC1P35052 558 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 EIF1AXP47813 144 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 PNLIPRP2P54317 469 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 EEFSECP57772 596 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 RAE1P78406 368 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 TNK1Q13470 666 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GGTA1PQ4G0N0 100 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 C10orf62Q5T681 223 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 METTL2BQ6P1Q9 378 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 TMEM107Q6UX40 140 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 ZNF704Q6ZNC4 412 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GALNT10Q86SR1 603 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 FADS6Q8N9I5 356 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 UHMK1Q8TAS1 419 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 ZNF675Q8TD23 568 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 ZNF483Q8TF39 744 aaPredicted RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 C16orf78Q8WTQ4 265 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 DTNBP1Q96EV8 351 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 PLPPR2Q96GM1 343 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GSX2Q9BZM3 304 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 RAB17Q9H0T7 212 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 RNF122Q9H9V4 155 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 BRF2Q9HAW0 419 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GIMAP4Q9NUV9 329 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 NMRK1Q9NWW6 199 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 NINJ2Q9NZG7 142 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 DMGDHQ9UI17 866 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 ZNF225Q9UK10 706 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 TMCO1Q9UM00 188 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 TLN2Q9Y4G6 2542 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
SEC23B-208ENST00000494645 CSPG4Q6UVK1 2322 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 EXPH5Q8NEV8 1989 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 MED12LQ86YW9 2145 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 HIVEP2P31629 2446 aa6.04□□□□□ -1.44
SEC23B-208ENST00000494645 GXYLT2A0PJZ3 443 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 A8MT66 165 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 RNF212BA8MTL3 300 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 POC1B-GALNT4F8VUJ3 575 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 EIF1AYO14602 144 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 CLOCKO15516 846 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 KLF4O43474 513 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 FADS1O60427 444 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 CRLF1O75462 422 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 TNFRSF21O75509 655 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 NTN1O95631 604 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 KRT6AP02538 564 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 KRT6BP04259 564 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 JUNP05412 331 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 INHBAP08476 426 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 RPS17P08708 135 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 CD8BP10966 210 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 PHBP35232 272 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 HSD17B3P37058 310 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 KRT6CP48668 564 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 HTR6P50406 440 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 NCBP2P52298 156 aaKnown RBP eCLIP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 CTBP2P56545 445 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 RPS3AP61247 264 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 TRA2BP62995 288 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 MRPS22P82650 360 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 C2orf80Q0P641 193 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 VEZF1Q14119 521 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 TSC22D1Q15714 1073 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 DECR1Q16698 335 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 CTU2Q2VPK5 515 aaKnown RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 BEX5Q5H9J7 111 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 XP32Q5T750 250 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 STAC2Q6ZMT1 411 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 FAM214BQ7L5A3 538 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 FAM9CQ8IZT9 166 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 ZNF619Q8N2I2 560 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 GBP7Q8N8V2 638 aaPredicted RBP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 GATSQ8NAP1 163 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 SPATA3Q8NHX4 192 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 RNF138Q8WVD3 245 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 SLC9A6Q92581 669 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 AKAP1Q92667 903 aaKnown RBP eCLIP6.03□□□□□ -1.44
SEC23B-208ENST00000494645 C1GALT1C1Q96EU7 318 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 APIPQ96GX9 242 aa6.03□□□□□ -1.44
SEC23B-208ENST00000494645 MRPL57Q9BQC6 102 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms