RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 STARD5Q9NSY2 213 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 ACTR3BQ9P1U1 418 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 P2RX2Q9UBL9 471 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 CSAG2Q9Y5P2 127 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 ATP8B3O60423 1300 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ADAMTS13Q76LX8 1427 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 MARF1Q9Y4F3 1742 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 UNC13BO14795 1591 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 RPRD2Q5VT52 1461 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 ANKRD30AQ9BXX3 1397 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 A0A087WWV3 80 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 LRIT2A6NDA9 550 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 C11orf98E9PRG8 122 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 CASKO14936 926 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 GPRIN2O60269 458 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ZNF354AO60765 605 aaPredicted RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 RHBDL1O75783 438 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 WNT2P09544 360 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ELK3P41970 407 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ZNF85Q03923 595 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 LRIT3Q3SXY7 679 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 UNC5DQ6UXZ4 953 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 RANBP3LQ86VV4 465 aaPredicted RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 ARL14Q8N4G2 192 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 MINDY2Q8NBR6 621 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ANKRD20A12PQ8NF67 263 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 FLVCR1-AS1Q8TAF5 88 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 TYMSOSQ8TAI1 123 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 U2AF1L4Q8WU68 220 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 ART4Q93070 314 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 ZBED6CLQ96FA7 236 aaPredicted RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 CCT8L2Q96SF2 557 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 TIGARQ9NQ88 270 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 CENPMQ9NSP4 180 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 DCAF13Q9NV06 445 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 GHRLQ9UBU3 117 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 PURGQ9UJV8 347 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 NALCNQ8IZF0 1738 aa3.44□□□□□ -1.86
SMC4-224ENST00000494612 XRN1Q8IZH2 1706 aaKnown RBP3.44□□□□□ -1.86
SMC4-224ENST00000494612 BRWD3Q6RI45 1802 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 NPIPA5A0A0B4J1W7 369 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 TTC26A0AVF1 554 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 NPIPA5E9PKD4 350 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 BUB1O43683 1085 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 TYROBPO43914 113 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 SCGB2A1O75556 95 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 IGHV3-9P01782 118 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ANXA4P09525 319 aaPredicted RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 ALPIP09923 528 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 RRASP10301 218 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ARF4P18085 180 aaPredicted RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 IL10P22301 178 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 CD86P42081 329 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ASMTP46597 345 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 HERVK_113P63132 956 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ERVK-8P63133 956 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 RUNX3Q13761 415 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 EIF2B1Q14232 305 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 PPP1R3AQ16821 1122 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ADPRMQ3LIE5 342 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 LINC00242Q5T6M2 205 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 SLX4IPQ5VYV7 408 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 SEL1L3Q68CR1 1132 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ZNF774Q6NX45 483 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 OLFM4Q6UX06 510 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 STOX1Q6ZVD7 989 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 FGFRL1Q8N441 504 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 BEST4Q8NFU0 473 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 OR52B4Q8NGK2 314 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 AGAP11Q8TF27 550 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 TADA1Q96BN2 335 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 CARD6Q9BX69 1037 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ERVK-6Q9BXR3 956 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 NMNAT2Q9BZQ4 307 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ZBP1Q9H171 429 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 KAT8Q9H7Z6 458 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 DUS2Q9NX74 493 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 RSPH14Q9UHP6 348 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ISY1Q9ULR0 285 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 SPHKAPQ2M3C7 1700 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 COL22A1Q8NFW1 1626 aaPredicted RBP3.43□□□□□ -1.86
SMC4-224ENST00000494612 PTPN23Q9H3S7 1636 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ABCC5O15440 1437 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 DAPK1P53355 1430 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 ADGRL3Q9HAR2 1447 aa3.43□□□□□ -1.86
SMC4-224ENST00000494612 GLI3P10071 1580 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 C1orf167Q5SNV9 1468 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 BCL9LQ86UU0 1499 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 RALGAPBQ86X10 1494 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 LAMC1P11047 1609 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 RGSL1A5PLK6 1076 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 ANKRD30BLA7E2S9 258 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 EFCAB7A8K855 629 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 E2F3O00716 465 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 HOXB7P09629 217 aa3.42□□□□□ -1.86
SMC4-224ENST00000494612 PVRP15151 417 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms