RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 UTS2O95399 124 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 IGKV1D-16P01601 117 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 ACP2P11117 423 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 TIMP3P35625 211 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 SLC1A6P48664 564 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 STARP49675 285 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 MLC1Q15049 377 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 AAGABQ6PD74 315 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 GALNT10Q86SR1 603 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 MARCH3Q86UD3 253 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 NUDT8Q8WV74 236 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 HOXB13Q92826 284 aaPredicted RBP30.15■■■□□ 2.42
CBX4-203ENST00000494546 C16orf58Q96GQ5 468 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 RTN4RQ9BZR6 473 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 C20orf27Q9GZN8 174 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 SIRT3Q9NTG7 399 aaPredicted RBP30.15■■■□□ 2.42
CBX4-203ENST00000494546 ATAD3AQ9NVI7 634 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 MED11Q9P086 117 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 RAP2CQ9Y3L5 183 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 SNX8Q9Y5X2 465 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 ARHGAP21Q5T5U3 1957 aa30.15■■■□□ 2.42
CBX4-203ENST00000494546 HCFC1P51610 2035 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 H0Y3Z8 333 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 IL2RAP01589 272 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 CPN1P15169 458 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 CEACAM8P31997 349 aaPredicted RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 MAP3K8P41279 467 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 GFRA1P56159 465 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 DSCR4P56555 118 aaPredicted RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 PRR5P85299 388 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 MAD2L1Q13257 205 aaPredicted RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 MFSD12Q6NUT3 480 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 FADS6Q8N9I5 356 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 SLC16A11Q8NCK7 471 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 OR2M3Q8NG83 312 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 FAM120BQ96EK7 910 aaKnown RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 OTUB1Q96FW1 271 aaPredicted RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 PRPF18Q99633 342 aaKnown RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 YIPF4Q9BSR8 244 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 TBL1XR1Q9BZK7 514 aa30.14■■■□□ 2.42
CBX4-203ENST00000494546 ZCCHC3Q9NUD5 404 aaKnown RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 MRPS18CQ9Y3D5 142 aaKnown RBP30.14■■■□□ 2.42
CBX4-203ENST00000494546 ADGRG4Q8IZF6 3080 aa30.14■■■□□ 2.41
CBX4-203ENST00000494546 CD8B2A6NJW9 211 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 ZIC3O60481 467 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 G6PDP11413 515 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 PRPS1L1P21108 318 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 BMP5P22003 454 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 GRAMD1BQ3KR37 738 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 DMRTC2Q8IXT2 367 aaPredicted RBP30.13■■■□□ 2.41
CBX4-203ENST00000494546 ANKRD42Q8N9B4 389 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 ZPLD1Q8TCW7 415 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 DUSP19Q8WTR2 217 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 JADE3Q92613 823 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 C14orf79Q96F83 325 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 TUBA1CQ9BQE3 449 aa30.13■■■□□ 2.41
CBX4-203ENST00000494546 DVL2O14641 736 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 ALOX5P09917 674 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 RPL14P50914 215 aaKnown RBP30.12■■■□□ 2.41
CBX4-203ENST00000494546 EMX2Q04743 252 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 STX3Q13277 289 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 DUSP5Q16690 384 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 CHMP6Q96FZ7 201 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 LURAP1Q96LR2 239 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 SORT1Q99523 831 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 CALHM2Q9HA72 323 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 NOP53Q9NZM5 478 aaKnown RBP30.12■■■□□ 2.41
CBX4-203ENST00000494546 EPB41L3Q9Y2J2 1087 aaPredicted RBP30.12■■■□□ 2.41
CBX4-203ENST00000494546 MED12Q93074 2177 aa30.12■■■□□ 2.41
CBX4-203ENST00000494546 PRIM2P49643 509 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 LHX2P50458 406 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 TLE4Q04727 773 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 HHATQ5VTY9 493 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 ZCCHC12Q6PEW1 402 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 FIGNL1Q6PIW4 674 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 OR5P2Q8WZ92 322 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 COQ8BQ96D53 544 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 PTGES2Q9H7Z7 377 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 AKTIPQ9H8T0 292 aa30.11■■■□□ 2.41
CBX4-203ENST00000494546 FBN2P35556 2912 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 MBD3L4A6NDZ8 208 aaPredicted RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 MBD3L3A6NE82 208 aaPredicted RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 MBD3L5A6NJ08 208 aaPredicted RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 ERLIN1O75477 346 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 SNUPNO95149 360 aaKnown RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 C6orf47O95873 294 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 HK1P19367 917 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 CHMP24386 653 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 ZNF136P52737 540 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 RIMKLAQ8IXN7 391 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 NATD1Q8N6N6 113 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 COX18Q8N8Q8 333 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 RELL2Q8NC24 303 aaPredicted RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 MBD3L2Q8NHZ7 208 aaPredicted RBP30.1■■■□□ 2.41
CBX4-203ENST00000494546 ABCA12Q86UK0 2595 aa30.1■■■□□ 2.41
CBX4-203ENST00000494546 KCNK2O95069 426 aa30.09■■■□□ 2.41
CBX4-203ENST00000494546 ANGPTL1O95841 491 aa30.09■■■□□ 2.41
CBX4-203ENST00000494546 HMGN2P05204 90 aaKnown RBP30.09■■■□□ 2.41
CBX4-203ENST00000494546 LASP1Q14847 261 aaKnown RBP30.09■■■□□ 2.41
CBX4-203ENST00000494546 LSM12Q3MHD2 195 aaKnown RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 268.5 ms