RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MAP3K8P41279 467 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 KIR3DL1P43629 444 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 RNF144AP50876 292 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-224ENST00000494132 CLDN8P56748 225 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 PSPHP78330 225 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 SPDYE7PQ495Y7 208 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 VASNQ6EMK4 673 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 PLXDC2Q6UX71 529 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 ANKRD46Q86W74 232 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 CDRT4Q8N9R6 151 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 GATSQ8NAP1 163 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 OR4K17Q8NGC6 315 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 RNF138Q8WVD3 245 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 OR5P2Q8WZ92 322 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 COQ8BQ96D53 544 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 OR2B2Q9GZK3 357 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 DSN1Q9H410 356 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 WDR55Q9H6Y2 383 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-224ENST00000494132 MEAF6Q9HAF1 191 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 ATAD3AQ9NVI7 634 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 ASIC5Q9NY37 505 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 MED11Q9P086 117 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 Q9UFV3 132 aa13.37□□□□□ -0.27
ATG4B-224ENST00000494132 CRYBG3Q68DQ2 2970 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 ALOX5P09917 674 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 ALDOCP09972 364 aaKnown RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 PRF1P14222 555 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 EPHA3P29320 983 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 STARP49675 285 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 HBA1P69905 142 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 PRR5P85299 388 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 SRYQ05066 204 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 MLC1Q15049 377 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 VPS26BQ4G0F5 336 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 TTMPQ5BVD1 217 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 AGBL2Q5U5Z8 902 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 APOOLQ6UXV4 268 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 SEM1Q6ZVN7 128 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 ACAD11Q709F0 780 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 OR5M1Q8NGP8 315 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 HOXB13Q92826 284 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 CDS1Q92903 461 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 ABTB1Q969K4 478 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 PRPF18Q99633 342 aaKnown RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 DPY30Q9C005 99 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 BHLHE41Q9C0J9 482 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 THAP1Q9NVV9 213 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 TAS2R10Q9NYW0 307 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 NTMQ9P121 344 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 MRTO4Q9UKD2 239 aaKnown RBP13.36□□□□□ -0.27
ATG4B-224ENST00000494132 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
ATG4B-224ENST00000494132 NPIPA5A0A0B4J1W7 369 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 NPIPA7E9PJI5 369 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 HNRNPRO43390 633 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TOXO94900 526 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 KCNK2O95069 426 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 NPIPA8P0DM63 369 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 GABRA1P14867 456 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 DPP4P27487 766 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 CHRNB4P30926 498 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 SRD5A2P31213 254 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 PRIM2P49643 509 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 SLC18A1P54219 525 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 PSMD4P55036 377 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 CASP9P55211 416 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 SMU1Q2TAY7 513 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 ACSF3Q4G176 576 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 ATG16L1Q676U5 607 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 IFNEQ86WN2 208 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 LIX1LQ8IVB5 337 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 WDR75Q8IWA0 830 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 NAXEQ8NCW5 288 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TNIP2Q8NFZ5 429 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 OR2M3Q8NG83 312 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 DUSP19Q8WTR2 217 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 WDYHV1Q96HA8 205 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 MARK4Q96L34 752 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 SFXN2Q96NB2 322 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TRIB1Q96RU8 372 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TBL1XR1Q9BZK7 514 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 PRDM14Q9GZV8 571 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
ATG4B-224ENST00000494132 ABCG2Q9UNQ0 655 aa13.35□□□□□ -0.27
ATG4B-224ENST00000494132 TTC36A6NLP5 189 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 ANGPTL1O95841 491 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 COX6B1P14854 86 aa13.34□□□□□ -0.27
ATG4B-224ENST00000494132 ZFP36L2P47974 494 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms