RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 APOOQ9BUR5 198 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 MTG2Q9H4K7 406 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 CRYBG1Q9Y4K1 1723 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 A0A0J9YY10 115 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF43P17038 809 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 RAB11BQ15907 218 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 TMEM151BQ8IW70 566 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF442Q9H7R0 627 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 A6NIZ1 184 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 CREBL2O60519 120 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ARL3P36405 182 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 CSNK1DP48730 415 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 RAP1BP61224 184 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 RAP1AP62834 184 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 HNRNPA1L2Q32P51 320 aaKnown RBP18.1■□□□□ 0.49
COL27A1-207ENST00000494090 PDLIM5Q96HC4 596 aaKnown RBP18.1■□□□□ 0.49
COL27A1-207ENST00000494090 PINK1Q9BXM7 581 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 BLACEA4D250 179 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 AGAP5A6NIR3 686 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 UPK1BO75841 260 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 NDUFB2O95178 105 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 UBL4AP11441 157 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 IFNGR1P15260 489 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 TRNP1Q6NT89 227 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 OR14L1PQ8NHC6 308 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 TANKQ92844 425 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 DNTTIP1Q9H147 329 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 CLMPQ9H6B4 373 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 SMAD6O43541 496 aaKnown RBP18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ACTBP60709 375 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ACTG1P63261 375 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 CDNFQ49AH0 187 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 TPSD1Q9BZJ3 242 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ADAM18Q9Y3Q7 739 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 PCDHA9Q9Y5H5 950 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 TNFRSF4P43489 277 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 CXCR4P61073 352 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 SLC22A10Q63ZE4 541 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 OR5AR1Q8NGP9 310 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 MSLNLQ96KJ4 702 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ZFP57Q9NU63 452 aa18.1■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF850A8MQ14 1090 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 PPP6CO00743 305 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SEC14L5O43304 696 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 IFNA1P01562 189 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SFTPBP07988 381 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 CRABP1P29762 137 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 FNTBP49356 437 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 LEG1Q6P5S2 330 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 TMEM205Q6UW68 189 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 OR4K13Q8NH42 304 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 CDH20Q9HBT6 801 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 NLKQ9UBE8 527 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 FAM227AF5H4B4 570 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 CASC3O15234 703 aaKnown RBP18.09■□□□□ 0.49
COL27A1-207ENST00000494090 AGTR1P30556 359 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 LBX1P52954 281 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SYT14Q8NB59 555 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 HYLS1Q96M11 299 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SLC6A7Q99884 636 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 ASB4Q9Y574 426 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 A0A0U1RQS6 177 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 CENPBD1B2RD01 187 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 ANKRD28O15084 1053 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 GM2AP17900 193 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 FOLR3P41439 243 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 POU3F4P49335 361 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 PIN1Q13526 163 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-207ENST00000494090 NEIL2Q969S2 332 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SPTSSAQ969W0 71 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 NUP98P52948 1817 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SMCO3A2RU48 225 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 M0R3H8 397 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 GRPRP30550 384 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 CTXN1P60606 82 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 FAM205BPQ63HN1 556 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 HTR3DQ70Z44 454 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 FAM217AQ8IXS0 508 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 SAMD8Q96LT4 415 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 C5AR2Q9P296 337 aa18.09■□□□□ 0.49
COL27A1-207ENST00000494090 hCG_1807616A0A1W2PRN6 198 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 EFCAB7A8K855 629 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 OR2T1O43869 369 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF534Q76KX8 674 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 ABHD5Q8WTS1 349 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 ACTR10Q9NZ32 417 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 FOSL2P15408 326 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 FGL2Q14314 439 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 VWA5B2Q8N398 1253 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 GALNT11Q8NCW6 608 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 C20orf27Q9GZN8 174 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 TMEM168Q9H0V1 697 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 RNF215Q9Y6U7 377 aa18.08■□□□□ 0.49
COL27A1-207ENST00000494090 CA3P07451 260 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 CA5AP35218 305 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 RSU1Q15404 277 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 LRRC37A5PQ49AS3 106 aa18.08■□□□□ 0.48
COL27A1-207ENST00000494090 RNASE10Q5GAN6 216 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms