RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PNCKQ6P2M8 343 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 KDELC1Q6UW63 502 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 IL27RAQ6UWB1 636 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 FAM92BQ6ZTR7 304 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 H2AFVQ71UI9 128 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TIPARPQ7Z3E1 657 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 RABEPKQ7Z6M1 372 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TBC1D1Q86TI0 1168 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ARMC8Q8IUR7 673 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF547Q8IVP9 402 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF567Q8N184 647 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 C17orf53Q8N3J3 647 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF843Q8N446 348 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ARL14Q8N4G2 192 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 C2orf73Q8N5S3 287 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ESX1Q8N693 406 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM178AQ8NBL3 297 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PCYOX1LQ8NBM8 494 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ANKRD20A12PQ8NF67 263 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OR56A4Q8NGH8 313 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OR13C4Q8NGS5 318 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC110Q8TBZ0 833 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 BLOC1S5Q8TDH9 187 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 KCNE4Q8WWG9 221 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ART4Q93070 314 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ISG20Q96AZ6 181 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 INTS12Q96CB8 462 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 AP2M1Q96CW1 435 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PPP1R16AQ96I34 528 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC114Q96M63 670 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 FOXN4Q96NZ1 517 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OLFM3Q96PB7 478 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 RNF157Q96PX1 679 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PSKH2Q96QS6 385 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OR2M4Q96R27 311 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 NUDCD1Q96RS6 583 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TRIB3Q96RU7 358 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SERINC2Q96SA4 455 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PIP5K1AQ99755 562 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TRIM62Q9BVG3 475 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OR2AG1Q9H205 316 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 P2RY12Q9H244 342 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 LRRN3Q9H3W5 708 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ATP13A3Q9H7F0 1226 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 NHEJ1Q9H9Q4 299 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 NLGN3Q9NZ94 848 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 FLRT3Q9NZU0 649 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 STOX2Q9P2F5 926 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ATXN10Q9UBB4 475 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SPASTQ9UBP0 616 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 HPCAL4Q9UM19 191 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SCML1Q9UN30 329 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 MOB4Q9Y3A3 225 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ARL5AQ9Y689 179 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SPTBN1Q01082 2364 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SPTAN1Q13813 2472 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 hCG_1818297A0A087WSY0 165 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 A0A087WV48 116 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 IGHV1OR21-1A0A087WYE8 117 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 LOC101059948A0A1B0GTJ6 334 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 A6NCN8 305 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 EFCAB7A8K855 629 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CDRT15L2A8MXV6 281 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 GOLGA8KD6RF30 607 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 LMO7DNF2Z398 122 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 F5H0A9 414 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 GOLGA8TH3BQL2 631 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 J3QR06 171 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CACNB4O00305 520 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SPOPO43791 374 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CST8O60676 142 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CDC123O75794 336 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 C9P02748 559 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 H1F0P07305 194 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZSCAN5DPP0CG00 497 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 UBL4AP11441 157 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 GZMAP12544 262 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SELLP14151 372 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CCNB1P14635 433 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CD1CP29017 333 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HNRNPH3P31942 346 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 MAGEA1P43355 309 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 SPINT3P49223 89 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 KIAA1024LP59773 190 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 AP1S1P61966 158 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HNRNPKP61978 463 aaKnown RBP eCLIP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 PPIDQ08752 370 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ELP6Q0PNE2 266 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CSTF3Q12996 717 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 RAPSNQ13702 412 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HNRNPDQ14103 355 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 TOMM20Q15388 145 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 IGFBP7Q16270 282 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 CCSMST1Q4G0I0 132 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 PYCR3Q53H96 274 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 HENMT1Q5T8I9 393 aaKnown RBP2.68□□□□□ -1.98
PTCD3-218ENST00000493430 MARC1Q5VT66 337 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 ZDHHC20Q5W0Z9 365 aa2.68□□□□□ -1.98
PTCD3-218ENST00000493430 FAM199XQ6PEV8 388 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms