RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 BHLHB9Q6PI77 547 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 FIGLAQ6QHK4 219 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 C19orf48Q6RUI8 117 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 DGAT2L6Q6ZPD8 337 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 SLC22A18ASQ8N1D0 253 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 SFXN5Q8TD22 340 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF764Q96H86 408 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TRNT1Q96Q11 434 aaKnown RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 NELL2Q99435 816 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TIGARQ9NQ88 270 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ZSCAN32Q9NX65 697 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ACTR10Q9NZ32 417 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 MALT1Q9UDY8 824 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 MUTYHQ9UIF7 546 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF443Q9Y2A4 671 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 LOC110117498-PIK3R3F6TDL0 507 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 H0YGG7 62 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SGK494L7N484 410 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 AP3D1O14617 1153 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 GNB5O14775 395 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SNX4O95219 450 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 RAB36O95755 333 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 NT5EP21589 574 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 OMPP47874 163 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SMSP52788 366 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 GAS1P54826 345 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SMIM11AP58511 58 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 ARF3P61204 181 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 Q6ZS52 159 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 Q6ZSR6 202 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 DEFB119Q8N690 84 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 GRHL3Q8TE85 626 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 C1GALT1C1Q96EU7 318 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SLC41A3Q96GZ6 507 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SAMD8Q96LT4 415 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SPATA5L1Q9BVQ7 753 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 NXF2Q9GZY0 626 aaKnown RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 RMI1Q9H9A7 625 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 DAPP1Q9UN19 280 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 GXYLT2A0PJZ3 443 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 GUCY1B2O75343 617 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 MED26O95402 600 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SRP54P61011 504 aaKnown RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 DAB2P98082 770 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 RHAGQ02094 409 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 ABI3BPQ7Z7G0 1075 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 METTL27Q8N6F8 245 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 OR4K14Q8NGD5 310 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 ASB15Q8WXK1 588 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 RSC1A1Q92681 617 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 MRPL38Q96DV4 380 aaKnown RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 MS4A4EQ96PG1 132 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 NEDD4LQ96PU5 975 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 ARHGDIGQ99819 225 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 TXNL4BQ9NX01 149 aaKnown RBP11.61□□□□□ -0.55
HMGN1-220ENST00000492280 MSRAQ9UJ68 235 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 CFL2Q9Y281 166 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 RP1P56715 2156 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 SPAG17Q6Q759 2223 aa11.61□□□□□ -0.55
HMGN1-220ENST00000492280 H3BQ06 376 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CASC3O15234 703 aaKnown RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 SLITRK5O94991 958 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TSPAN19P0C672 248 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 HTR2AP28223 471 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TEAD1P28347 426 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 SDC2P34741 201 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CDH11P55287 796 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 RPS15AP62244 130 aaKnown RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TRAM2Q15035 370 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 GDPD3Q7L5L3 318 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 Q8N9G6 341 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TMEM163Q8TC26 289 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 RLN3Q8WXF3 142 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 FGF11Q92914 225 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TBC1D17Q9HA65 648 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 NDUFB11Q9NX14 153 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TESQ9UGI8 421 aaKnown RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 A6NCN8 305 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 HRKO00198 91 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 RDH16O75452 317 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 LIMS3P0CW19 117 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 LIMS4P0CW20 117 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 CPMP14384 443 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 MYL12AP19105 171 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TNFRSF4P43489 277 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 MTNR1AP48039 350 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-220ENST00000492280 NCF4Q15080 339 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 BAK1Q16611 211 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
HMGN1-220ENST00000492280 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms