RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FAM83EQ2M2I3 478 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 FAM174BQ3ZCQ3 159 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 CCDC91Q7Z6B0 441 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 METTL25Q8N6Q8 603 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 L3MBTL4Q8NA19 623 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 WDR20Q8TBZ3 569 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 FBF1Q8TES7 1133 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 FAM168AQ92567 244 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-222ENST00000491867 CACNG6Q9BXT2 260 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 PLLPQ9Y342 182 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 SNX8Q9Y5X2 465 aa12.34□□□□□ -0.43
ATG4B-222ENST00000491867 DPRXA6NFQ7 191 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 FOXE1O00358 373 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-222ENST00000491867 TO15178 435 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 SEMA3DO95025 777 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 C2P06681 752 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 PORP16435 677 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-222ENST00000491867 MAGEA4P43358 317 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 PIK3CGP48736 1102 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 PLTPP55058 493 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 CAV1Q03135 178 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 GTF2H2Q13888 395 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 TAB1Q15750 504 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATG4B-222ENST00000491867 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 GTF2H2CQ6P1K8 395 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 FIGNL1Q6PIW4 674 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 GOLGA7Q7Z5G4 137 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 RFLNBQ8N5W9 214 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 FBXO25Q8TCJ0 367 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 HSD17B8Q92506 261 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 SLC35A4Q96G79 324 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 C12orf49Q9H741 205 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 IPPKQ9H8X2 491 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 MAT2BQ9NZL9 334 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 PPP4R1LQ9P1A2 415 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
ATG4B-222ENST00000491867 HMX2A2RU54 273 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 LINC01387J3KSC0 135 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 CBX7O95931 251 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 PYGBP11216 843 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 IL32P24001 234 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 EIF1AXP47813 144 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 CDH11P55287 796 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 MAP4K2Q12851 820 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 EFR3AQ14156 821 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 ACAP2Q15057 778 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 RAB35Q15286 201 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 PRICKLE4Q2TBC4 344 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 METTL2BQ6P1Q9 378 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 ZDHHC24Q6UX98 284 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 LARP4Q71RC2 724 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 OR52R1Q8NGF1 315 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 PIWIL2Q8TC59 973 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 PROX1Q92786 737 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 ZMYND19Q96E35 227 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 HDHD5Q9BXW7 423 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 MED11Q9P086 117 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 XPR1Q9UBH6 696 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 ZNF639Q9UID6 485 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 GPR55Q9Y2T6 319 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 UTP11Q9Y3A2 253 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 TNPO3Q9Y5L0 923 aaKnown RBP12.32□□□□□ -0.44
ATG4B-222ENST00000491867 VWFP04275 2813 aa12.32□□□□□ -0.44
ATG4B-222ENST00000491867 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 EIF1AYO14602 144 aaKnown RBP12.31□□□□□ -0.44
ATG4B-222ENST00000491867 SCO2O43819 266 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 TSPAN2O60636 221 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 GCM2O75603 506 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-222ENST00000491867 KLHL2O95198 593 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 CLDN9O95484 217 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 FEN1P39748 380 aaKnown RBP12.31□□□□□ -0.44
ATG4B-222ENST00000491867 EMDP50402 254 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 GUCY2DQ02846 1103 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
ATG4B-222ENST00000491867 KLC3Q6P597 504 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 SEZ6L2Q6UXD5 910 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 GPR78Q96P69 363 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 CDK15Q96Q40 435 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 SERPINI1Q99574 410 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 ZBTB26Q9HCK0 441 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 FBXO34Q9NWN3 711 aa12.31□□□□□ -0.44
ATG4B-222ENST00000491867 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
ATG4B-222ENST00000491867 PRODH2Q9UF12 536 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms