RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SYT5O00445 386 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 TO15178 435 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 ACOX3O15254 700 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 NPIPA8P0DM63 369 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 PEX2P28328 305 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 OTX2P32243 289 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 VHLP40337 213 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 LARS2Q15031 903 aaKnown RBP19.29■□□□□ 0.68
SND1-214ENST00000489417 EXT1Q16394 746 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 IQCCQ4KMZ1 466 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 LIN52Q52LA3 116 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 OGFRL1Q5TC84 451 aaPredicted RBP19.29■□□□□ 0.68
SND1-214ENST00000489417 ICA1LQ8NDH6 482 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 OR11G2Q8NGC1 345 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 NUBPLQ8TB37 319 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 TP53INP1Q96A56 240 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 HSPBAP1Q96EW2 488 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 IMMP1LQ96LU5 166 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 LMF1Q96S06 567 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 BDH2Q9BUT1 245 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 MRTO4Q9UKD2 239 aaKnown RBP19.29■□□□□ 0.68
SND1-214ENST00000489417 SLC13A4Q9UKG4 626 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 GVINP1Q7Z2Y8 2422 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 RIF1Q5UIP0 2472 aaKnown RBP19.29■□□□□ 0.68
SND1-214ENST00000489417 CENPVL1A0A0U1RR11 272 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 PEX12O00623 359 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 IL33O95760 270 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 LGI1O95970 557 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 IFNW1P05000 195 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 IL7RP16871 459 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 F8A1P23610 371 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 PSMD4P55036 377 aaKnown RBP19.28■□□□□ 0.68
SND1-214ENST00000489417 PSPHP78330 225 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 PUM1Q14671 1186 aaKnown RBP eCLIP19.28■□□□□ 0.68
SND1-214ENST00000489417 MAPK14Q16539 360 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 BTBD16Q32M84 506 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 TSEN54Q7Z6J9 526 aaKnown RBP19.28■□□□□ 0.68
SND1-214ENST00000489417 PACS2Q86VP3 889 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 COMTD1Q86VU5 262 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 CARM1Q86X55 608 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 SLC34A3Q8N130 599 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 NKD1Q969G9 470 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 TMBIM1Q969X1 311 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 VPS50Q96JG6 964 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 NDUFAF4Q9P032 175 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 KCNE5Q9UJ90 142 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 SLC9A8Q9Y2E8 581 aa19.28■□□□□ 0.68
SND1-214ENST00000489417 NSG1A0A0A6YYJ2 146 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 GNGT2O14610 69 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 UGT2B17O75795 530 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 ZFAND5O76080 213 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 DIRAS1O95057 198 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 PRSS23O95084 383 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 EPPINO95925 133 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 CAPNS1P04632 268 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 ITGA2P17301 1181 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 SDHBP21912 280 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 EIPR1Q53HC9 387 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 OR2T5Q6IEZ7 315 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 ZNF836Q6ZNA1 936 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 NDUFAF7Q7L592 441 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 OR5L2Q8NGL0 311 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 OR2T29Q8NH02 315 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 VANGL1Q8TAA9 524 aaPredicted RBP19.27■□□□□ 0.68
SND1-214ENST00000489417 ZNF300Q96RE9 604 aaPredicted RBP19.27■□□□□ 0.68
SND1-214ENST00000489417 AMBRA1Q9C0C7 1298 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 VCX3BQ9H321 246 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 NTN4Q9HB63 628 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 KLHL28Q9NXS3 571 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 KCND3Q9UK17 655 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 PCDHGA6Q9Y5G7 932 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 ENPP4Q9Y6X5 453 aa19.27■□□□□ 0.68
SND1-214ENST00000489417 FAM186AA6NE01 2351 aa19.27■□□□□ 0.67
SND1-214ENST00000489417 DCDC2BA2VCK2 349 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 CDC14CA4D256 554 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 SAC3D1A6NKF1 404 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 NPIPB9F8W1W9 429 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 M0R3H8 397 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 DXOO77932 396 aaKnown RBP19.26■□□□□ 0.67
SND1-214ENST00000489417 NID1P14543 1247 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 KRT20P35900 424 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 DCTP40126 519 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 ATP12AP54707 1039 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 EEF1A1P68104 462 aaKnown RBP19.26■□□□□ 0.67
SND1-214ENST00000489417 PLCXD2Q0VAA5 305 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 ZNF141Q15928 474 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 NRF1Q16656 503 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 LRRC36Q1X8D7 754 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 GRAMD1BQ3KR37 738 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 PLAG1Q6DJT9 500 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 DTX1Q86Y01 620 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 PRR22Q8IZ63 422 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 IL22RA1Q8N6P7 574 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 CATSPER1Q8NEC5 780 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 OR4D11Q8NGI4 311 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 M1APQ8TC57 530 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 ELP5Q8TE02 316 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 EME1Q96AY2 570 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 NACC2Q96BF6 587 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 EFHD2Q96C19 240 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms