RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PLA2G16P53816 162 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 RPS6P62753 249 aaKnown RBP3.49□□□□□ -1.85
XRN1-213ENST00000489241 ZNF33BQ06732 778 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 RAB35Q15286 201 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 SYPL1Q16563 259 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 FAM74A3Q4VXF1 159 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 BOLA3Q53S33 107 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 CYBRD1Q53TN4 286 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ACER2Q5QJU3 275 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ATF7IP2Q5U623 682 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 SLX4IPQ5VYV7 408 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 SEL1L3Q68CR1 1132 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 PMF1Q6P1K2 205 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ANKRD37Q7Z713 158 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ZNF683Q8IZ20 524 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 LRRC43Q8N309 656 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 Q8NBF4 154 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 TRMT10AQ8TBZ6 339 aaKnown RBP3.49□□□□□ -1.85
XRN1-213ENST00000489241 TAF15Q92804 592 aaKnown RBP eCLIP3.49□□□□□ -1.85
XRN1-213ENST00000489241 EMG1Q92979 244 aaKnown RBP3.49□□□□□ -1.85
XRN1-213ENST00000489241 ZBTB18Q99592 522 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 OMDQ99983 421 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 TCHPQ9BT92 498 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 TMEM121Q9BTD3 319 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 SP140LQ9H930 580 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 CLEC4AQ9UMR7 237 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 MMP24Q9Y5R2 645 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ZSCAN5BA6NJL1 495 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 SOCS3O14543 225 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 STX7O15400 261 aaKnown RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 PPIHO43447 177 aaKnown RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 STX11O75558 287 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 SEMA4FO95754 770 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 NUDT14O95848 222 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 JCHAINP01591 159 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 ZNF883P0CG24 379 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 TPSB2P20231 275 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 ZNF10P21506 573 aaPredicted RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 UGT1A4P22310 534 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 PPP2R1BP30154 601 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 SULT1E1P49888 294 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 CSRP3P50461 194 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 PRELPP51888 382 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 MFAP2P55001 183 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 AIF1P55008 147 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 GSTO1P78417 241 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 EWSR1Q01844 656 aaKnown RBP eCLIP3.48□□□□□ -1.85
XRN1-213ENST00000489241 TNFRSF17Q02223 184 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 PDK3Q15120 406 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 FCN2Q15485 313 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 TPSAB1Q15661 275 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 PCK2Q16822 640 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 KRT71Q3SY84 523 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 GGTA1PQ4G0N0 100 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 CCDC183Q5T5S1 534 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 RFWD3Q6PCD5 774 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 ZNF613Q6PF04 617 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 METTL7BQ6UX53 244 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 STXBP4Q6ZWJ1 553 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 HSD11B1LQ7Z5J1 315 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 KIAA1328Q86T90 577 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 FAM3CQ92520 227 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 MYLPFQ96A32 169 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 TADA1Q96BN2 335 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 SLC41A3Q96GZ6 507 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 ZNF599Q96NL3 588 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 SLC30A2Q9BRI3 323 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 GON7Q9BXV9 100 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 NFKBIZQ9BYH8 718 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 POLR3FQ9H1D9 316 aaPredicted RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 NUDT4Q9NZJ9 180 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 C6orf203Q9P0P8 240 aaPredicted RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 CYTH4Q9UIA0 394 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 ANAPC7Q9UJX3 599 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 PTBP2Q9UKA9 531 aaKnown RBP3.48□□□□□ -1.85
XRN1-213ENST00000489241 WDR45Q9Y484 360 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 CPQQ9Y646 472 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 AUP1Q9Y679 476 aa3.48□□□□□ -1.85
XRN1-213ENST00000489241 GRIN2DO15399 1336 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 TRBV7-9A0A0J9YWB2 115 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 A0A0J9YWU9 116 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 C11orf98E9PRG8 122 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 AP3B1O00203 1094 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 BTN3A3O00478 584 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 PRRG1O14668 218 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 ARPC3O15145 178 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 IGHV3-9P01782 118 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 CAPN1P07384 714 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 TPM2P07951 284 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 H2AFXP16104 143 aaPredicted RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 TBXA2RP21731 343 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 SPRP35270 261 aaPredicted RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 BDKRB1P46663 353 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 GSK3BP49841 420 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 EMDP50402 254 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 ATXN7L3Q14CW9 347 aaPredicted RBP3.47□□□□□ -1.85
XRN1-213ENST00000489241 ZMYND11Q15326 602 aa3.47□□□□□ -1.85
XRN1-213ENST00000489241 ZIC1Q15915 447 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms