RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SZRD1Q7Z422 152 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 LURAP1LQ8IV03 231 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 CDRT4Q8N9R6 151 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 OR4K17Q8NGC6 315 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 C16orf58Q96GQ5 468 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 MS4A4EQ96PG1 132 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 TRIB1Q96RU8 372 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 SORT1Q99523 831 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 DSN1Q9H410 356 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 C3orf14Q9HBI5 128 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 KCNK9Q9NPC2 374 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 DKKL1Q9UK85 242 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 MRTO4Q9UKD2 239 aaKnown RBP22.68■■□□□ 1.22
HMGN1-217ENST00000489072 MRPS18CQ9Y3D5 142 aaKnown RBP22.68■■□□□ 1.22
HMGN1-217ENST00000489072 MED12LQ86YW9 2145 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 CD8B2A6NJW9 211 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 ZWINTO95229 277 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 UTS2O95399 124 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 BGNP21810 368 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 SSTR2P30874 369 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 GCKP35557 465 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 TIMP3P35625 211 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 RPL3P39023 403 aaKnown RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 STARP49675 285 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 STX5Q13190 355 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 PDCD2Q16342 344 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 EXOSC6Q5RKV6 272 aaKnown RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 MFSD12Q6NUT3 480 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 POMZP3Q6PJE2 187 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 GALNT10Q86SR1 603 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 MARCH3Q86UD3 253 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 RIMKLAQ8IXN7 391 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 DMRTC2Q8IXT2 367 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 RELL2Q8NC24 303 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 SLC16A11Q8NCK7 471 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 OR2M3Q8NG83 312 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 SLC9A6Q92581 669 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 FAM120BQ96EK7 910 aaKnown RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 C14orf79Q96F83 325 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 PPP1R36Q96LQ0 422 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 LURAP1Q96LR2 239 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 TUBA1CQ9BQE3 449 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 RPH3AQ9Y2J0 694 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-217ENST00000489072 CCDC168Q8NDH2 2452 aa22.67■■□□□ 1.22
HMGN1-217ENST00000489072 A0A1W2PRB8 838 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 KCNH1O95259 989 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 LHX2P50458 406 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 ZNF136P52737 540 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 PSMD4P55036 377 aaKnown RBP22.66■■□□□ 1.22
HMGN1-217ENST00000489072 DLX5P56178 289 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 B3GALT5-AS1P59052 145 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 KRTAP10-9P60411 292 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 SRYQ05066 204 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 SF3B4Q15427 424 aaKnown RBP eCLIP22.66■■□□□ 1.222e-7■■■■□ 20.5
HMGN1-217ENST00000489072 DUSP5Q16690 384 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 GRAMD1BQ3KR37 738 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 VPS26BQ4G0F5 336 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 CPTPQ5TA50 214 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 APOOLQ6UXV4 268 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 ZPLD1Q8TCW7 415 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 COQ8BQ96D53 544 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 OTUB1Q96FW1 271 aaPredicted RBP22.66■■□□□ 1.22
HMGN1-217ENST00000489072 SFXN2Q96NB2 322 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 YIPF4Q9BSR8 244 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 G6PC3Q9BUM1 346 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 CALHM2Q9HA72 323 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 MED11Q9P086 117 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 RAP2CQ9Y3L5 183 aa22.66■■□□□ 1.22
HMGN1-217ENST00000489072 MBD3L4A6NDZ8 208 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 MBD3L3A6NE82 208 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 MBD3L5A6NJ08 208 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 G6PDP11413 515 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 DDX5P17844 614 aaKnown RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 SLC1A6P48664 564 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 DSCR4P56555 118 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 EMX2Q04743 252 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 ENPP6Q6UWR7 440 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 ZAR1Q86SH2 424 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 CROCCP2Q86T23 111 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 C9orf106Q8NAJ2 232 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 MBD3L2Q8NHZ7 208 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 FAM110BQ8TC76 370 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 DUSP19Q8WTR2 217 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 DTNBP1Q96EV8 351 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 ZCCHC3Q9NUD5 404 aaKnown RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 ANKRD17O75179 2603 aaKnown RBP22.65■■□□□ 1.22
HMGN1-217ENST00000489072 SPG11Q96JI7 2443 aa22.65■■□□□ 1.22
HMGN1-217ENST00000489072 IL2RAP01589 272 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 PRPS1L1P21108 318 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 BMP5P22003 454 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 CLDN18P56856 261 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 TLE4Q04727 773 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 RCAN2Q14206 197 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 PLXDC2Q6UX71 529 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 ADGRE4PQ86SQ3 457 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 PSMA8Q8TAA3 256 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 OR5P2Q8WZ92 322 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 CXorf36Q9H7Y0 433 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 AKTIPQ9H8T0 292 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms