RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ADGRD2Q7Z7M1 963 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 FBXO25Q8TCJ0 367 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ITLN1Q8WWA0 313 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 JAKMIP1Q96N16 626 aaKnown RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 PANX3Q96QZ0 392 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ALDH8A1Q9H2A2 487 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 LIME1Q9H400 295 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 SPG21Q9NZD8 308 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ABCD2Q9UBJ2 740 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 EXOC7Q9UPT5 735 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 FBXO7Q9Y3I1 522 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ZFP37Q9Y6Q3 630 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 CLSPNQ9HAW4 1339 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 KIF26AQ9ULI4 1882 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 CELSR1Q9NYQ6 3014 aa3.34□□□□□ -1.88
ITGB1-214ENST00000488427 GON4LQ3T8J9 2241 aa3.34□□□□□ -1.88
ITGB1-214ENST00000488427 NOTCH1P46531 2555 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 A0A0U1RQK1 487 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF320A2RRD8 509 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 C19orf81C9J6K1 198 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 F5H6K3 240 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 PHOX2AO14813 284 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 SFTPBP07988 381 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 HCKP08631 526 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 SERPINF2P08697 491 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 EIF2S2P20042 333 aaKnown RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 BCL3P20749 454 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 KRTAP10-3P60369 221 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 BEX3Q00994 111 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 CRMP1Q14194 572 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 MORF4L2Q15014 288 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 SF3A2Q15428 464 aaKnown RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 TAF7Q15545 349 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 OR1C1Q15619 314 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 TRADDQ15628 312 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 SHROOM1Q2M3G4 852 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 NHLRC3Q5JS37 347 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 MARC1Q5VT66 337 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 Q6ZRG5 221 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF584Q8IVC4 421 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 MYOCDQ8IZQ8 938 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 ABCA7Q8IZY2 2146 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 RTL3Q8N8U3 475 aaKnown RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 TRPV3Q8NET8 790 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 OR6M1Q8NGM8 313 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 TYMSOSQ8TAI1 123 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 ATP6V1E2Q96A05 226 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 MRPL24Q96A35 216 aaKnown RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 NUSAP1Q9BXS6 441 aaKnown RBP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 WWP1Q9H0M0 922 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 POMKQ9H5K3 350 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 GDF3Q9NR23 364 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 SEC14L4Q9UDX3 406 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 OR1A2Q9Y585 309 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 GRIN2DO15399 1336 aa3.33□□□□□ -1.88
ITGB1-214ENST00000488427 NIPBLQ6KC79 2804 aaeCLIP3.33□□□□□ -1.88
ITGB1-214ENST00000488427 LOXHD1Q8IVV2 1947 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 HIVEP1P15822 2718 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 PDZD2O15018 2839 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 LRRD1A4D1F6 860 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF724A8MTY0 619 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MEI4A8MW99 385 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 C5orf67F2Z3F1 127 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MCF2LO15068 1137 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 CSO75390 466 aaKnown RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 PRDM1O75626 825 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 EPOP01588 193 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 PCCAP05165 728 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 GLULP15104 373 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 GLRA1P23415 457 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 RDXP35241 583 aaKnown RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MAGEB1P43366 347 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 TNNT3P45378 269 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 FNTAP49354 379 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 SLC7A2P52569 658 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 ADARP55265 1226 aaKnown RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 SLC17A1Q14916 467 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 HEPACAMQ14CZ8 416 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 PCK2Q16822 640 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 SMU1Q2TAY7 513 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MPPE1Q53F39 396 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 IFI44LQ53G44 452 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 GLRA4Q5JXX5 417 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 KCTD11Q693B1 232 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 CDC42EP5Q6NZY7 148 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 LAX1Q8IWV1 398 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 FBXL16Q8N461 479 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 OR1K1Q8NGR3 316 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 FIBINQ8TAL6 211 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 HAS2Q92819 552 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 AGPAT1Q99943 283 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 FUT8Q9BYC5 575 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MAGEF1Q9HAY2 307 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MAD2L2Q9UI95 211 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MRTO4Q9UKD2 239 aaKnown RBP3.32□□□□□ -1.88
ITGB1-214ENST00000488427 VSIG4Q9Y279 399 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms