RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 ZNF497Q6ZNH5 498 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 VASH2Q86V25 355 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 OR4Q3Q8NH05 313 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 TBCKQ8TEA7 893 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 SLC5A11Q8WWX8 675 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 ZNF689Q96CS4 500 aaPredicted RBP4.61□□□□□ -1.67
CUL3-211ENST00000487558 ZNF607Q96SK3 696 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 VGLL1Q99990 258 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 RBM4BQ9BQ04 359 aaKnown RBP4.61□□□□□ -1.67
CUL3-211ENST00000487558 ZSCAN5AQ9BUG6 496 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 ADNPQ9H2P0 1102 aa4.61□□□□□ -1.67
CUL3-211ENST00000487558 C15orf38-AP3S2A0A0A6YYH1 394 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ZSCAN5CA6NGD5 496 aaPredicted RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 FAM74A7A6NL05 159 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ZNF487B1APH4 448 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 LCMT2O60294 686 aaKnown RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 IGHV3-9P01782 118 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 OPN1LWP04000 364 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 SDC1P18827 310 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 GLRA2P23416 452 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 RGS4P49798 205 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ACTR1AP61163 376 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 CBX1P83916 185 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 PJVKQ0ZLH3 352 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 CYLC2Q14093 348 aaPredicted RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 CRMP1Q14194 572 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 MAPK6Q16659 721 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 FAM74A3Q4VXF1 159 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 C14orf177Q52M58 125 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ZNF343Q6P1L6 599 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 PAQR6Q6TCH4 344 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 LANCL3Q6ZV70 420 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 STXBP4Q6ZWJ1 553 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 HSD11B1LQ7Z5J1 315 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 Q8N377 158 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ZSCAN4Q8NAM6 433 aaPredicted RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 OR52M1Q8NGK5 317 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 ZNF606Q8WXB4 792 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 OSTF1Q92882 214 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 POLR3FQ9H1D9 316 aaPredicted RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 RHOJQ9H4E5 214 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 GORASP2Q9H8Y8 452 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 FAM120CQ9NX05 1096 aaKnown RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 MRPL39Q9NYK5 338 aaKnown RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 C6orf203Q9P0P8 240 aaPredicted RBP4.6□□□□□ -1.67
CUL3-211ENST00000487558 RNF14Q9UBS8 474 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 CYTH4Q9UIA0 394 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 CRLS1Q9UJA2 301 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 SMC3Q9UQE7 1217 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 NTNG1Q9Y2I2 539 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 GSTK1Q9Y2Q3 226 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 WDR45Q9Y484 360 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 IKBKGQ9Y6K9 419 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 KDRP35968 1356 aa4.6□□□□□ -1.67
CUL3-211ENST00000487558 MBLAC1A4D2B0 266 aaPredicted RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 LRRTM2O43300 516 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 RIPK2O43353 540 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 TRIM3O75382 744 aaPredicted RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 MTX2O75431 263 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 TM7SF2O76062 418 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 GAS8-AS1O95177 125 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 JCHAINP01591 159 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 H2AFZP0C0S5 128 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 MAGEA5P43359 124 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 RPL34P49207 117 aaKnown RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 BDH1Q02338 343 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 PLOD1Q02809 727 aaPredicted RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 GPM6BQ13491 265 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 ATXN7L3Q14CW9 347 aaPredicted RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 MICAQ29983 383 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 CCDC152Q4G0S7 254 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 RABGAP1LQ5R372 815 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 CELF3Q5SZQ8 465 aaKnown RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 MEDAGQ5VYS4 303 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 PRSS48Q7RTY5 328 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 TIPARPQ7Z3E1 657 aaKnown RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 PARGQ86W56 976 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 TMEM17Q86X19 198 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 OR2T3Q8NH03 318 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 TRMT10AQ8TBZ6 339 aaKnown RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 RASL10AQ92737 203 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 C18orf25Q96B23 403 aaPredicted RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 SDSLQ96GA7 329 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 OMDQ99983 421 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 ELOVL2Q9NXB9 296 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 ATP10DQ9P241 1426 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 MRPS33Q9Y291 106 aaKnown RBP4.59□□□□□ -1.67
CUL3-211ENST00000487558 MAB21L2Q9Y586 359 aa4.59□□□□□ -1.67
CUL3-211ENST00000487558 IGKV3D-15A0A087WSY6 115 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 ZSCAN12O43309 604 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 GALR3O60755 368 aaPredicted RBP4.58□□□□□ -1.68
CUL3-211ENST00000487558 SH3BGRLO75368 114 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 IGHV3-13P01766 116 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 MELTFP08582 738 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 HBQ1P09105 142 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 IQCF3P0C7M6 154 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 XRCC1P18887 633 aaPredicted RBP4.58□□□□□ -1.68
CUL3-211ENST00000487558 NT5EP21589 574 aa4.58□□□□□ -1.68
CUL3-211ENST00000487558 PAX7P23759 505 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms