RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CSTF3Q12996 717 aaKnown RBP17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 SGCBQ16585 318 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 TSNAXIP1Q2TAA8 658 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 STAC2Q6ZMT1 411 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 GGNQ86UU5 652 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 OR6K3Q8NGY3 331 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 PLPPR2Q96GM1 343 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 TMEM204Q9BSN7 226 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 C1QTNF3Q9BXJ4 246 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 ACSS3Q9H6R3 686 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 CLEC4AQ9UMR7 237 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 EMC9Q9Y3B6 208 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 AP4B1Q9Y6B7 739 aa17.44■□□□□ 0.38
SMPDL3A-202ENST00000487215 RTTNQ86VV8 2226 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 UQCRHLA0A096LP55 91 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 GNG14A0A1W2PPG7 69 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 A8MT66 165 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 SHISA8B8ZZ34 492 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 COQ9O75208 318 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 DMTNQ08495 405 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 HEPACAMQ14CZ8 416 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 GLYR1Q49A26 553 aaPredicted RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 CYP27C1Q4G0S4 372 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 PPP4R4Q6NUP7 873 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 MARCH3Q86UD3 253 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 WFDC8Q8IUA0 241 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 CDYL2Q8N8U2 506 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 MAPK1IP1LQ8NDC0 245 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 C16orf78Q8WTQ4 265 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 DUSP19Q8WTR2 217 aa17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 NANOS1Q8WY41 292 aaKnown RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 MRPL57Q9BQC6 102 aaKnown RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 MRPL46Q9H2W6 279 aaKnown RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 FAM120CQ9NX05 1096 aaKnown RBP17.43■□□□□ 0.38
SMPDL3A-202ENST00000487215 KRT6AP02538 564 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 KRT6BP04259 564 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 SBK3P0C264 359 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 MPIP34949 423 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 HSD17B3P37058 310 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 EIF1AXP47813 144 aaKnown RBP17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 KRT6CP48668 564 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 TMEM44Q2T9K0 475 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 LGSNQ5TDP6 509 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 HEPHL1Q6MZM0 1159 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 SYT10Q6XYQ8 523 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 APIPQ96GX9 242 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 GMPPAQ96IJ6 420 aaPredicted RBP17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 PRRG4Q9BZD6 226 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 ACPTQ9BZG2 426 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 ACTR6Q9GZN1 396 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 NINJ2Q9NZG7 142 aa17.42■□□□□ 0.38
SMPDL3A-202ENST00000487215 ESYT3A0FGR9 886 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 RNF223E7ERA6 249 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 EIF1AYO14602 144 aaKnown RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 SS18L1O75177 396 aaPredicted RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 PLGP00747 810 aaPredicted RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 COL6A2P12110 1019 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 TIA1P31483 386 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 HTR6P50406 440 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 CTBP2P56545 445 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 RPS4XP62701 263 aaKnown RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 CLCQ05315 142 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 VEZF1Q14119 521 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 DECR1Q16698 335 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 CLEC12BQ2HXU8 276 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 PRSS53Q2L4Q9 553 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 SPIN4Q56A73 249 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 C8orf74Q6P047 294 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 TMEM151AQ8N4L1 468 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 AKAP1Q92667 903 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 BBS4Q96RK4 519 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 EBPLQ9BY08 206 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 DMGDHQ9UI17 866 aaKnown RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 LAMP3Q9UQV4 416 aa17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 CHD3Q12873 2000 aaKnown RBP17.41■□□□□ 0.38
SMPDL3A-202ENST00000487215 USF3Q68DE3 2245 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 A0A087WV62 115 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 IGLV3-32A0A0A0MS00 114 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 MYO1GB0I1T2 1018 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 GMFGO60234 142 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 IL33O95760 270 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 JUNP05412 331 aaKnown RBP17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 INHBAP08476 426 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 IL11P20809 199 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 RFX3P48380 749 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 CLK3P49761 638 aaKnown RBP17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 ACSM2AQ08AH3 577 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 RASA2Q15283 850 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 ACSM2BQ68CK6 577 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 TMEM107Q6UX40 140 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 OR10D3Q8NH80 312 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 SHCBP1LQ9BZQ2 653 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 Q9N2J8 555 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 ZDHHC18Q9NUE0 388 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 C19orf53Q9UNZ5 99 aaPredicted RBP17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 STAB1Q9NY15 2570 aa17.4■□□□□ 0.38
SMPDL3A-202ENST00000487215 ROS1P08922 2347 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms