RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 PRPH2P23942 346 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 KCNJ5P48544 419 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 KIAA1024LP59773 190 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 IRF3Q14653 427 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 CDONQ4KMG0 1287 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 FAM69AQ5T7M9 428 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 TCTN3Q6NUS6 607 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 TMCO2Q7Z6W1 182 aaPredicted RBP7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF480Q8WV37 535 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 FOXJ1Q92949 421 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 SFXN2Q96NB2 322 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 ERVMER34-1Q9H9K5 563 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 ASB6Q9NWX5 421 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 SDHAF2Q9NX18 166 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 SLC6A14Q9UN76 642 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 SLC45A1Q9Y2W3 748 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 MED31Q9Y3C7 131 aa7.22□□□□□ -1.25
COL6A4P1-202ENST00000487147 LTBP3Q9NS15 1303 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 TRBV2A0A0J9YWF9 115 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 SLC9B1P1A6NJY1 282 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 INPPL1O15357 1258 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 RPP14O95059 124 aaKnown RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 TP53P04637 393 aaPredicted RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 EPCAMP16422 314 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF10P21506 573 aaPredicted RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 IMPA1P29218 277 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 GATMP50440 423 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ACTC1P68032 377 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ACTA1P68133 377 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 TNK1Q13470 666 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 GK2Q14410 553 aaPredicted RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 PON3Q15166 354 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 SWI5Q1ZZU3 235 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 KHDRBS2Q5VWX1 349 aaKnown RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 RNF165Q6ZSG1 346 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF366Q8N895 744 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 LMNTD1Q8N9Z9 388 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF527Q8NB42 609 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 INO80EQ8NBZ0 244 aaPredicted RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 OR8K3Q8NH51 312 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF461Q8TAF7 563 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 GRHL3Q8TE85 626 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 HMGB4Q8WW32 186 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 CNOT9Q92600 299 aaKnown RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 UCN3Q969E3 161 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 MSLNLQ96KJ4 702 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 DDOQ99489 341 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ZNF416Q9BWM5 594 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 MIXL1Q9H2W2 232 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 TMEM185BQ9H7F4 350 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 TREM1Q9NP99 234 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 ABT1Q9ULW3 272 aaKnown RBP7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 COPS3Q9UNS2 423 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 LRRC37AA6NMS7 1700 aa7.21□□□□□ -1.25
COL6A4P1-202ENST00000487147 OR6C74A6NCV1 312 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ARRDC5A6NEK1 342 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 UNC119BA6NIH7 251 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 UBL3O95164 117 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 SNRPBP14678 240 aaKnown RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ZNF250P15622 560 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 GABRB1P18505 474 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 PVALBP20472 110 aaPredicted RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 NFYAP23511 347 aaPredicted RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 AHCYP23526 432 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 CD70P32970 193 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 RAP2BP61225 183 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 TSPAN31Q12999 210 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 LRRC37A5PQ49AS3 106 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 PRAMEF17Q5VTA0 474 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 TPRA1Q86W33 373 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ZNF683Q8IZ20 524 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 COX18Q8N8Q8 333 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 OR5J2Q8NH18 312 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 TSEN15Q8WW01 171 aaKnown RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ZNF689Q96CS4 500 aaPredicted RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 OTUB2Q96DC9 234 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ZNF558Q96NG5 402 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 SAMD11Q96NU1 681 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 CDCP1Q9H5V8 836 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 TRPV4Q9HBA0 871 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 C14orf105Q9NVL8 296 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 HPF1Q9NWY4 346 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 PLEKHB1Q9UF11 243 aaPredicted RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 UBR3Q6ZT12 1888 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 NAP1L6A6NFF2 107 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 MANSC4A6NHS7 340 aaPredicted RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 SGK494L7N484 410 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 B4GALT3O60512 393 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ETHE1O95571 254 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 IGHA2P01877 340 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 PRKAR2AP13861 404 aaKnown RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 GLULP15104 373 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 GJA1P17302 382 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 PSMB1P20618 241 aaKnown RBP7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 ITGB7P26010 798 aa7.21□□□□□ -1.26
COL6A4P1-202ENST00000487147 NAA10P41227 235 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms