RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ENTPD8Q5MY95 495 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 ARHGAP40Q5TG30 622 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 BROXQ5VW32 411 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 PGBD2Q6P3X8 592 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 TMPRSS9Q7Z410 1059 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 RANBP3LQ86VV4 465 aaPredicted RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 TMEM151BQ8IW70 566 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 ALDH16A1Q8IZ83 802 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 RNF113BQ8IZP6 322 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 CLIP4Q8N3C7 705 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 C17orf47Q8NEP4 570 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 OR9Q2Q8NGE9 314 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 C16orf52Q8NHV5 167 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 RHOXF1Q8NHV9 184 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 PTPMT1Q8WUK0 201 aaPredicted RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 TRUB1Q8WWH5 349 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 IPCEF1Q8WWN9 437 aaPredicted RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 SENP5Q96HI0 755 aaPredicted RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 GFM1Q96RP9 751 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 MCHR1Q99705 422 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 NIPSNAP1Q9BPW8 284 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 WFDC6Q9BQY6 131 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 RBCK1Q9BYM8 510 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 DUSP21Q9H596 190 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 SCN3BQ9NY72 215 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 DHCR7Q9UBM7 475 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 FTSJ1Q9UET6 329 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 TESQ9UGI8 421 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 MRTO4Q9UKD2 239 aaKnown RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 ATXN7L1Q9ULK2 861 aaPredicted RBP10.79□□□□□ -0.68
PRKCB-207ENST00000486868 ERVK-19Q9WJR5 959 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 TPRKBQ9Y3C4 175 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 PCDHGA6Q9Y5G7 932 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 MAU2Q9Y6X3 613 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 SCN3AQ9NY46 2000 aa10.79□□□□□ -0.68
PRKCB-207ENST00000486868 MYOCOSA0A1B0GUC4 107 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 GXYLT2A0PJZ3 443 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 FRG2CA6NGY1 282 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZAR1LA6NP61 321 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 C17orf105B2RV13 164 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 PATE3B3GLJ2 98 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 POLR1CO15160 346 aaPredicted RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 TO15178 435 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 FLRT2O43155 660 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 OR10H3O60404 316 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 TPST2O60704 377 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ANGPTL1O95841 491 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 TNNI3P19429 210 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ACP1P24666 158 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 SSTR4P31391 388 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 MPLP40238 635 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF136P52737 540 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ATP12AP54707 1039 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 SLC37A1P57057 533 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 IL5RAQ01344 420 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 IL1RL1Q01638 556 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 SEC23BQ15437 767 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 GPR68Q15743 365 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 MEP1AQ16819 746 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 CTU2Q2VPK5 515 aaKnown RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 NADK2Q4G0N4 442 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 FLYWCH1Q4VC44 716 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 PLA2G2CQ5R387 149 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 LAIR2Q6ISS4 152 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF613Q6PF04 617 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 OLIG3Q7RTU3 272 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF550Q7Z398 422 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 WDR53Q7Z5U6 358 aaPredicted RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF440Q8IYI8 595 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 OR4K5Q8NGD3 323 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 GNPDA2Q8TDQ7 276 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ACOT11Q8WXI4 607 aaPredicted RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 PIK3R3Q92569 461 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 CCDC74BQ96LY2 380 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 LRFN5Q96NI6 719 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 CCNL2Q96S94 520 aaPredicted RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 ZNF559Q9BR84 538 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 QRSL1Q9H0R6 528 aaKnown RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 SLC26A1Q9H2B4 701 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 KRCC1Q9NPI7 259 aaPredicted RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 REV1Q9UBZ9 1251 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 CBLCQ9ULV8 474 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 PPIEQ9UNP9 301 aaKnown RBP10.78□□□□□ -0.68
PRKCB-207ENST00000486868 CLCA3PQ9Y6N3 262 aa10.78□□□□□ -0.68
PRKCB-207ENST00000486868 PCDH15Q96QU1 1955 aa10.77□□□□□ -0.68
PRKCB-207ENST00000486868 A0A087WUU8 490 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 SH3D21A4FU49 640 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 TRAPPC13A5PLN9 417 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 HTR3EA5X5Y0 456 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 VSTM2BA6NLU5 285 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 D6RAR5 112 aa10.77□□□□□ -0.69
PRKCB-207ENST00000486868 ZNF701M0R085 212 aaPredicted RBP10.77□□□□□ -0.69
PRKCB-207ENST00000486868 SLC1A7O00341 560 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms