RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SOX3P41225 446 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 RFX3P48380 749 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 CDK6Q00534 326 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 CHRNEQ04844 493 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 MEP1AQ16819 746 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 VMACQ2NL98 169 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 GPAT3Q53EU6 434 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ATAD3BQ5T9A4 648 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 PGM2L1Q6PCE3 622 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 LINC00696Q6ZRV3 163 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 C16orf62Q7Z3J2 963 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 MICU2Q8IYU8 434 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 BEST3Q8N1M1 668 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 SLC15A4Q8N697 577 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 OR2T12Q8NG77 320 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 EFHD2Q96C19 240 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ZG16BQ96DA0 208 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 TRNT1Q96Q11 434 aaKnown RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ADOQ96SZ5 270 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 SPATA9Q9BWV2 254 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ALG2Q9H553 416 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ZBTB20Q9HC78 741 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 THUMPD1Q9NXG2 353 aaKnown RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 PLA2G3Q9NZ20 509 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 FLRT3Q9NZU0 649 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 P2RX2Q9UBL9 471 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 PRPF19Q9UMS4 504 aaKnown RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 LIPT1Q9Y234 373 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 NPIPA5A0A0B4J1W7 369 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 ELOVL7A1L3X0 281 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 NPIPA7E9PJI5 369 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 RRP9O43818 475 aaKnown RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 PPM1BO75688 479 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 H6PDO95479 791 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 F10P00742 488 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 BCHEP06276 602 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 FBXO45P0C2W1 286 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 NPIPA8P0DM63 369 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 HSD17B1P14061 328 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 TCN1P20061 433 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 SSR4P51571 173 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 NRG3P56975 720 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 FBXW4P57775 412 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 RBBP4Q09028 425 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 PLCXD2Q0VAA5 305 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 SCARB2Q14108 478 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 DECR1Q16698 335 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF630Q2M218 657 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF791Q3KP31 576 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 CRB2Q5IJ48 1285 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 RPS26P11Q5JNZ5 115 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 AGAP7PQ5VUJ5 663 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 IRAK1BP1Q5VVH5 260 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 TYW3Q6IPR3 259 aaKnown RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 IL20RBQ6UXL0 311 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 FRRS1Q6ZNA5 592 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 LRRC74BQ6ZQY2 392 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 HMGN2P46Q86SG4 172 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 HPS6Q86YV9 775 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 LURAP1LQ8IV03 231 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 FBXW8Q8N3Y1 598 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 C11orf65Q8NCR3 313 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 C9orf43Q8TAL5 461 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 SLC22A8Q8TCC7 542 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 DIO2Q92813 273 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 AGAP4Q96P64 663 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 KCTD14Q9BQ13 255 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 PCDHAC1Q9H158 963 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 SLC38A1Q9H2H9 487 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 ANKRD10Q9NXR5 420 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 EGFL7Q9UHF1 273 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 MKLN1Q9UL63 735 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 TNRC6AQ8NDV7 1962 aaKnown RBP11.75□□□□□ -0.53
HDAC6-229ENST00000486665 MED13Q9UHV7 2174 aa11.75□□□□□ -0.53
HDAC6-229ENST00000486665 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 DNAJA2O60884 412 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 UGT2B11O75310 529 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 STX11O75558 287 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 PGM3O95394 542 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 WDPCPO95876 746 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 AK1P00568 194 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 CYP4B1P13584 511 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 NCK1P16333 377 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 NAGAP17050 411 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ME2P23368 584 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 HTR1EP28566 365 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 PCGF2P35227 344 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 MS4A2Q01362 244 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 GPR68Q15743 365 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 MAPK14Q16539 360 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 AP1ARQ63HQ0 302 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 REEP3Q6NUK4 255 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms