RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 KLF9Q13886 244 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ESPNLQ6ZVH7 1005 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 PAQR7Q86WK9 346 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 BBS1Q8NFJ9 593 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR8K3Q8NH51 312 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 PIGKQ92643 395 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 BTBD1Q9H0C5 482 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR10A4Q9H209 315 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 DDX31Q9H8H2 851 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 EVA1AQ9H8M9 152 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 TAAR2Q9P1P5 351 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 D6RAR5 112 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SGTAO43765 313 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SUSD5O60279 629 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 MTX2O75431 263 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 UBXN7O94888 489 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 UBL3O95164 117 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 IGHA1P01876 353 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 ADRB1P08588 477 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 TBXA2RP21731 343 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CD52P31358 61 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 ATP6V1E1P36543 226 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 VEGFCP49767 419 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 ARHGDIBP52566 201 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 HTR4Q13639 388 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 IGSF11Q5DX21 431 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PABPC1L2AQ5JQF8 200 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 AADACL4Q5VUY2 407 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SLC22A10Q63ZE4 541 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 OR5M10Q6IEU7 315 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CHST9Q7L1S5 443 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 OLIG3Q7RTU3 272 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 GPR142Q7Z601 462 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 HMGN2P46Q86SG4 172 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SLITRK4Q8IW52 837 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 FANK1Q8TC84 345 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 NEIL2Q969S2 332 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 WBP2Q969T9 261 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 LRRC46Q96FV0 321 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SLC38A3Q99624 504 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 GSDMCQ9BYG8 508 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 STOX2Q9P2F5 926 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CA5BQ9Y2D0 317 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 A0A0B4J203 849 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 SEPT4O43236 478 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 GALR3O60755 368 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 B4GALT2O60909 372 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 NTN1O95631 604 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 IL3P08700 152 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 GSTM3P21266 225 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CORO1AP31146 461 aaKnown RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 S100A11P31949 105 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 AP1S1P61966 158 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 TLE2Q04725 743 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 TMEM255AQ5JRV8 349 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PLEKHS1Q5SXH7 462 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PDSS1Q5T2R2 415 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 MED27Q6P2C8 311 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PM20D2Q8IYS1 436 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 CPXM2Q8N436 756 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 OR4D9Q8NGE8 314 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 OR5T2Q8NGG2 359 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 HAVCR2Q8TDQ0 301 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 RFKQ969G6 155 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 NEURL3Q96EH8 262 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 LCORQ96JN0 433 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 C7orf50Q9BRJ6 194 aaKnown RBP9.98□□□□□ -0.81
CCDC171-208ENST00000486641 AUNIPQ9H7T9 357 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 BRD9Q9H8M2 597 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 MYNNQ9NPC7 610 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 EMC3Q9P0I2 261 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 NTMQ9P121 344 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PRKAG2Q9UGJ0 569 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 PADI3Q9ULW8 664 aa9.98□□□□□ -0.81
CCDC171-208ENST00000486641 IGLV3-16A0A075B6K0 115 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 PRAMEF27A3QJZ7 478 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 CARNS1A5YM72 827 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 MPTX1A8MV57 137 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 LRRN3E7EW58 273 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 HMGN4O00479 90 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 SIGLEC6O43699 453 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 SIX6O95475 246 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 IRF1P10914 325 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 ATP1B2P14415 290 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-208ENST00000486641 GABRA1P14867 456 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 HOXC8P31273 242 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 RPL3P39023 403 aaKnown RBP9.97□□□□□ -0.81
CCDC171-208ENST00000486641 CSKP41240 450 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 RAD52P43351 418 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 PITPNAQ00169 270 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 DEFA5Q01523 94 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 SCRN3Q0VDG4 424 aa9.97□□□□□ -0.81
CCDC171-208ENST00000486641 DYRK1AQ13627 763 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms