RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TRBC2A0A5B9 178 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 HYKKA2RU49 373 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 C3orf70A6NLC5 250 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 E9PLN8 166 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 PRRG2O14669 202 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SSX5O60225 188 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 WBP4O75554 376 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SIX3O95343 332 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 AHSA1O95433 338 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 RPN2P04844 631 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ANXA2P07355 339 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SNRPAP09012 282 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 HSMCR30P0CW71 290 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 COX6A1P12074 109 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 MTHFD2P13995 350 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ABOP16442 354 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 FBLP22087 321 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 TCEA1P23193 301 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ACRV1P26436 265 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ACADLP28330 430 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CRABP2P29373 138 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 BSGP35613 385 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 GGT5P36269 586 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 GRIA3P42263 894 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ILF2Q12905 390 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SNTB1Q13884 538 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 PRPSAP1Q14558 356 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 MESDQ14696 234 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 PCLAFQ15004 111 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SF1Q15637 639 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CEBPEQ15744 281 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SGCAQ16586 387 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SYTL3Q4VX76 610 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF766Q5HY98 468 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 WASHC2DQ5SRD0 308 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 LRRC38Q5VT99 294 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF425Q6IV72 752 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 FAM122CQ6P4D5 195 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 UTS2BQ765I0 119 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 DCXRQ7Z4W1 244 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SERPINA9Q86WD7 417 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 GAS2L3Q86XJ1 694 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CCDC50Q8IVM0 306 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF567Q8N184 647 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 TBC1D19Q8N5T2 526 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SLC15A4Q8N697 577 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CLDN19Q8N6F1 224 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 METTL27Q8N6F8 245 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CEP112Q8N8E3 955 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ASCC1Q8N9N2 400 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SCAIQ8N9R8 606 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 MINDY2Q8NBR6 621 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 FAM98AQ8NCA5 519 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 C11orf65Q8NCR3 313 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 OR13C4Q8NGS5 318 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 IFT81Q8WYA0 676 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ELMO1Q92556 727 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 P3H4Q92791 437 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 METTL2AQ96IZ6 378 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 GPR137Q96N19 417 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF285Q96NJ3 590 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 FICDQ9BVA6 458 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CACNG6Q9BXT2 260 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 RTN4RQ9BZR6 473 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 QRSL1Q9H0R6 528 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 UNKLQ9H9P5 680 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 ARL8BQ9NVJ2 186 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 C14orf105Q9NVL8 296 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 SMARCAL1Q9NZC9 954 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 OSGIN1Q9UJX0 560 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 AAR2Q9Y312 384 aaKnown RBP6.31□□□□□ -1.4
HDAC3-209ENST00000486618 CACNG2Q9Y698 323 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 TEX264Q9Y6I9 313 aa6.31□□□□□ -1.4
HDAC3-209ENST00000486618 HCFC1P51610 2035 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 A0A087WZY1 265 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 TRBV5-4A0A0C4DH59 114 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 MYOCOSA0A1B0GUC4 107 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 C2orf92A0A1B0GVN3 265 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 OOEPA6NGQ2 149 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 OR6C70A6NIJ9 312 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 LIPT2A6NK58 231 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 HACD1B0YJ81 288 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 CENPBD1B2RD01 187 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 IDSB3KWA1 339 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 NPIPA5E9PKD4 350 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 F8WDY8 70 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 CST8O60676 142 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 CCNB2O95067 398 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 TSPAN12O95859 305 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 CALCBP10092 127 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 ITGAMP11215 1152 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 PTNP21246 168 aa6.3□□□□□ -1.4
HDAC3-209ENST00000486618 PEBP1P30086 187 aaKnown RBP6.3□□□□□ -1.4
HDAC3-209ENST00000486618 PKLRP30613 574 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms