RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 TMEM114B3SHH9 223 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 HCRTR2O43614 444 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 ZIC3O60481 467 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 TSPAN2O60636 221 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 SMNDC1O75940 238 aaKnown RBP eCLIP16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 IL3P08700 152 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 CHMP24386 653 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 DIO3P55073 304 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 GAB1Q13480 694 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 ARL13AQ5H913 290 aaPredicted RBP16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 VWA1Q6PCB0 445 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 ZNF675Q8TD23 568 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 DYDC1Q8WWB3 177 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 EXOSC8Q96B26 276 aaKnown RBP16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 VSTM2LQ96N03 204 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 ZNF395Q9H8N7 513 aaPredicted RBP16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 NDRG3Q9UGV2 375 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 TRPS1Q9UHF7 1281 aa16.52■□□□□ 0.24
RHBDF1-209ENST00000486045 MANBAO00462 879 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 ABCB7O75027 752 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 ENO1P06733 434 aaKnown RBP16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 CHRNGP07510 517 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 DPP4P27487 766 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 IL12BP29460 328 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 SLC1A6P48664 564 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 GAS1P54826 345 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 B3GALT5-AS1P59052 145 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 ABCE1P61221 599 aaKnown RBP16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 TRA2BP62995 288 aaKnown RBP16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 Q5PR19 223 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 ATG16L1Q676U5 607 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 P4HA3Q7Z4N8 544 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 UBQLNLQ8IYU4 475 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 CDYL2Q8N8U2 506 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 CNEP1R1Q8N9A8 125 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 OR4N2Q8NGD1 307 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 METTL6Q8TCB7 284 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 RNF138Q8WVD3 245 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 EFHD2Q96C19 240 aaPredicted RBP16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 STARD4Q96DR4 205 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 WFIKKN1Q96NZ8 548 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 SHCBP1LQ9BZQ2 653 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 FOLH1BQ9HBA9 442 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 KLHL28Q9NXS3 571 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 DLGAP4Q9Y2H0 992 aa16.51■□□□□ 0.23
RHBDF1-209ENST00000486045 DEFB108AA8MXU0 73 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 H0YC42 278 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 MSTNO14793 375 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 ITM2AO43736 263 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 SNUPNO95149 360 aaKnown RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 HSPA4LO95757 839 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 FGF4P08620 206 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 ARRB2P32121 409 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 TPD52P55327 224 aaPredicted RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 RAE1P78406 368 aaKnown RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 BST1Q10588 318 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 SCIMPQ6UWF3 145 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 SLC44A2Q8IWA5 706 aaPredicted RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 CIARTQ8N365 385 aaPredicted RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 OPN3Q9H1Y3 402 aaPredicted RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 NMRK1Q9NWW6 199 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 MCM8Q9UJA3 840 aa16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.5■□□□□ 0.23
RHBDF1-209ENST00000486045 SLC22A20A6NK97 555 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 KLF11O14901 512 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 SCO2O43819 266 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 PCDH7O60245 1069 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 CRCPO75575 148 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 LYPLA1O75608 230 aaPredicted RBP16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 BCAS2O75934 225 aaPredicted RBP16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 KRT6AP02538 564 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 KRT6BP04259 564 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 HEXAP06865 529 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 HMOX2P30519 316 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 CCKARP32238 428 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 KRT20P35900 424 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 KRT6CP48668 564 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 HTR6P50406 440 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 CLDN15P56746 228 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 SIRPAP78324 504 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 EFR3AQ14156 821 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 ZNF474Q6S9Z5 364 aaPredicted RBP16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 BTLAQ7Z6A9 289 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 P3H2Q8IVL5 708 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 HOMEZQ8IX15 550 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 OR7G2Q8NG99 324 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 FAM76AQ8TAV0 307 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 LRRC8CQ8TDW0 803 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 CKAP2Q8WWK9 683 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 FIG4Q92562 907 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 PIK3IP1Q96FE7 263 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 ACPTQ9BZG2 426 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 C20orf27Q9GZN8 174 aa16.49■□□□□ 0.23
RHBDF1-209ENST00000486045 DSN1Q9H410 356 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms