RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TRAPPC6AO75865 159 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ZWINTO95229 277 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 IL18BPO95998 194 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 IL2RAP01589 272 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 SERPINE1P05121 402 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 CYP4B1P13584 511 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PRF1P14222 555 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PRPS1L1P21108 318 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MSX1P28360 303 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 IL12BP29460 328 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 GCKP35557 465 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MC3RP41968 323 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MASP1P48740 699 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PCYT1AP49585 367 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 CLK3P49761 638 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 DIO3P55073 304 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 DSCR4P56555 118 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 CLDN8P56748 225 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 CORO7P57737 925 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PRR5P85299 388 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 C17orf67Q0P5P2 114 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 GANABQ14697 944 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 ZNHIT3Q15649 155 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS50-218ENST00000485994 LSM12Q3MHD2 195 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 FBXL19-AS1Q494R0 122 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ATP6AP1LQ52LC2 224 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 EIPR1Q53HC9 387 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ZNF385BQ569K4 471 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 SH2D4BQ5SQS7 431 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 DESI1Q6ICB0 168 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 POMZP3Q6PJE2 187 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ENPP6Q6UWR7 440 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ANGPTL8Q6UXH0 198 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 SEM1Q6ZVN7 128 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 NCCRP1Q6ZVX7 275 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 ZNF551Q7Z340 670 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 GDF7Q7Z4P5 450 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 CAMKMTQ7Z624 323 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 LACC1Q8IV20 430 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MCEMP1Q8IX19 187 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 RPRMLQ8N4K4 120 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 FADS6Q8N9I5 356 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 CDRT4Q8N9R6 151 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 NUP43Q8NFH3 380 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 OR4N2Q8NGD1 307 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 GOT1L1Q8NHS2 421 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 MBD3L2Q8NHZ7 208 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 PPCDCQ96CD2 204 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 GIMAP5Q96F15 307 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 C3orf30Q96M34 536 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ZFP3Q96NJ6 502 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PRPF18Q99633 342 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 UGT2B28Q9BY64 529 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 TRIM8Q9BZR9 551 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 SLC6A15Q9H2J7 730 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 ATAD3AQ9NVI7 634 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 DDX18Q9NVP1 670 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 FAM120CQ9NX05 1096 aaKnown RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 SH3BP4Q9P0V3 963 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 Q9UFV3 132 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 BAIAP2L1Q9UHR4 511 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 FOXD3Q9UJU5 478 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 RAP2CQ9Y3L5 183 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 OR10H1Q9Y4A9 318 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PTGDR2Q9Y5Y4 395 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 A0A1W2PQD3 144 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 A0A1W2PRB8 838 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TMEM233B4DJY2 109 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 ALG1L2C9J202 215 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 C19orf84I3L1E1 186 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 SCAMP2O15127 329 aaKnown RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 PEX11AO75192 247 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 RCBTB2O95199 551 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 KCNH1O95259 989 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 GUSBP08236 651 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 MYZAPP0CAP1 466 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TBXA2RP21731 343 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 GABRA3P34903 492 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TRPC1P48995 793 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 RPL14P50914 215 aaKnown RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 ABCE1P61221 599 aaKnown RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 RPL38P63173 70 aaKnown RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 MPP2Q14168 576 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 NNATQ16517 81 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 GALNTL6Q49A17 601 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 ACSF3Q4G176 576 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 WIPI1Q5MNZ9 446 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 CPTPQ5TA50 214 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 IL23RQ5VWK5 629 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 CES4AQ5XG92 561 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 AAGABQ6PD74 315 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TMEM107Q6UX40 140 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 ZCCHC23Q6ZST2 131 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 CCDC71Q8IV32 467 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 LIX1LQ8IVB5 337 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 TRIM42Q8IWZ5 723 aa6.36□□□□□ -1.39
VPS50-218ENST00000485994 DMRTC2Q8IXT2 367 aaPredicted RBP6.36□□□□□ -1.39
VPS50-218ENST00000485994 OR10Q1Q8NGQ4 319 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms