RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FBXW4P57775 412 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 EFR3AQ14156 821 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 NTRK2Q16620 822 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 RPS26P11Q5JNZ5 115 aaPredicted RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF468Q5VIY5 522 aaPredicted RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 TYW3Q6IPR3 259 aaKnown RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 IL20RBQ6UXL0 311 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 NUP54Q7Z3B4 507 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 HPS6Q86YV9 775 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 GPALPP1Q8IXQ4 340 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 ULK2Q8IYT8 1036 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 BBS10Q8TAM1 723 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 MMADHCQ9H3L0 296 aaPredicted RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 MKLN1Q9UL63 735 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 GSTA4O15217 222 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 HS6ST1O60243 411 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 KIAA0513O60268 411 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 UTS2O95399 124 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 WDPCPO95876 746 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 ITGB2P05107 769 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PCBP3P57721 371 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 GPR68Q15743 365 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 FXNQ16595 210 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 FLYWCH1Q4VC44 716 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 INTS11Q5TA45 600 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 DESI1Q6ICB0 168 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PTRH1Q86Y79 214 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF619Q8N2I2 560 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 OR5M3Q8NGP4 307 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PMM1Q92871 262 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 HGDQ93099 445 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 SMAD5Q99717 465 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 UTP23Q9BRU9 249 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 HOXD1Q9GZZ0 328 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 TRIM45Q9H8W5 580 aaPredicted RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 HPF1Q9NWY4 346 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 ANKRD10Q9NXR5 420 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PLA2G3Q9NZ20 509 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 EGFL7Q9UHF1 273 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PCDHGA9Q9Y5G4 932 aaKnown RBP16.16■□□□□ 0.18
CHMP3-207ENST00000485465 PCDHGA10Q9Y5H3 936 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 DSPPQ9NZW4 1301 aa16.16■□□□□ 0.18
CHMP3-207ENST00000485465 NPIPA5A0A0B4J1W7 369 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 NPIPA7E9PJI5 369 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 NPIPB9F8W1W9 429 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CXCR6O00574 342 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 GCM2O75603 506 aaPredicted RBP16.15■□□□□ 0.18
CHMP3-207ENST00000485465 NPIPA8P0DM63 369 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 GGT1P19440 569 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 AQP1P29972 269 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CD96P40200 585 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CASRP41180 1078 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CYB561P49447 251 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 BNIP2Q12982 314 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 TUBA3CQ13748 450 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 GRAMD1BQ3KR37 738 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 TUBA3EQ6PEY2 450 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 IGFL2Q6UWQ7 119 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CCDC80Q76M96 950 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 FAM13CQ8NE31 585 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 OR10G3Q8NGC4 313 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 OR4C3Q8NH37 302 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 FIG4Q92562 907 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 TTC9Q92623 222 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 EXTL1Q92935 676 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 ZG16BQ96DA0 208 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 TMCO6Q96DC7 493 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 CRELD1Q96HD1 420 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 SGCZQ96LD1 299 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 RNF32Q9H0A6 362 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 PCDHAC1Q9H158 963 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 PRORYQ9H606 182 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 UBQLN4Q9NRR5 601 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 FLRT3Q9NZU0 649 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 SUCOQ9UBS9 1254 aaKnown RBP16.15■□□□□ 0.18
CHMP3-207ENST00000485465 MED13Q9UHV7 2174 aa16.15■□□□□ 0.18
CHMP3-207ENST00000485465 DOCK10Q96BY6 2186 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 TP53I11O14683 189 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 ICOSLGO75144 302 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 GMNNO75496 209 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 F10P00742 488 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 ETS2P15036 469 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 NCK1P16333 377 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 TBXA2RP21731 343 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 KDELR2P33947 212 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 DCTP40126 519 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 ATP12AP54707 1039 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 POLE2P56282 527 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 OC90Q02509 493 aaPredicted RBP16.14■□□□□ 0.17
CHMP3-207ENST00000485465 TRIM25Q14258 630 aaKnown RBP16.14■□□□□ 0.17
CHMP3-207ENST00000485465 GLYATQ6IB77 296 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 RTL4Q6ZR62 310 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 PATL1Q86TB9 770 aaKnown RBP16.14■□□□□ 0.17
CHMP3-207ENST00000485465 KRT73Q86Y46 540 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 CYP4Z2PQ8N1L4 340 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 SPPL2AQ8TCT8 520 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 HAS2Q92819 552 aa16.14■□□□□ 0.17
CHMP3-207ENST00000485465 UTP4Q969X6 686 aaKnown RBP16.14■□□□□ 0.17
CHMP3-207ENST00000485465 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms