RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PNPLA2Q96AD5 504 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 TTC25Q96NG3 672 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 ANKRD27Q96NW4 1050 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 VPS35Q96QK1 796 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 PSMB7Q99436 277 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 ERVK-6Q9BXR3 956 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 MOB1AQ9H8S9 216 aa5.41□□□□□ -1.54
UBR3-210ENST00000484596 LRPPRCP42704 1394 aaKnown RBP5.41□□□□□ -1.54
UBR3-210ENST00000484596 YTHDC2Q9H6S0 1430 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 ARHGEF33A8MVX0 844 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 ANXA4P09525 319 aaPredicted RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 CD1DP15813 335 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 DLSTP36957 453 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 SGSHP51688 502 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 PPIAP62937 165 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 PAX8Q06710 450 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 FASTKQ14296 549 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 ECSCRQ19T08 205 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 ZNF699Q32M78 642 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 ZNF311Q5JNZ3 666 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 PAQR6Q6TCH4 344 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 P4HA3Q7Z4N8 544 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 CARM1Q86X55 608 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 CATSPER3Q86XQ3 398 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 ZDHHC21Q8IVQ6 265 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 FBXO25Q8TCJ0 367 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 SLC25A36Q96CQ1 311 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 CAPNS2Q96L46 248 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 POLR1EQ9GZS1 481 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 RPAP3Q9H6T3 665 aaPredicted RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 KAT8Q9H7Z6 458 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 WDR41Q9HAD4 459 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 STARD5Q9NSY2 213 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 RDH8Q9NYR8 311 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 THYN1Q9P016 225 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 TUBGCP4Q9UGJ1 667 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 FZR1Q9UM11 496 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 RRP15Q9Y3B9 282 aaKnown RBP5.4□□□□□ -1.54
UBR3-210ENST00000484596 AUP1Q9Y679 476 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 FKBP7Q9Y680 259 aa5.4□□□□□ -1.54
UBR3-210ENST00000484596 NRKQ7Z2Y5 1582 aa5.4□□□□□ -1.55
UBR3-210ENST00000484596 KDRP35968 1356 aa5.4□□□□□ -1.55
UBR3-210ENST00000484596 PEAK1Q9H792 1746 aa5.4□□□□□ -1.55
UBR3-210ENST00000484596 RGPD5Q99666 1765 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 NEDD8-MDP1E9PL57 170 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 H3BTX0 84 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 PDHXO00330 501 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 MAGEB3O15480 346 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 TBX19O60806 448 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 SPAG6O75602 509 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CLUP10909 449 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 PDHBP11177 359 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 SELEP16581 610 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 TSPAN8P19075 237 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 OTX2P32243 289 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 NUCB2P80303 420 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 SRYQ05066 204 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 EXOSC2Q13868 293 aaKnown RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 POM121L1PQ3SYA9 428 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CEP55Q53EZ4 464 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CFAP157Q5JU67 520 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 TCHHL1Q5QJ38 904 aaPredicted RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 ASPHD2Q6ICH7 369 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 SLC39A4Q6P5W5 647 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CBLN3Q6UW01 205 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 LHFPL4Q7Z7J7 247 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 RANBP3LQ86VV4 465 aaPredicted RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 CBWD2Q8IUF1 395 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CCDC36Q8IYA8 594 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 OR52M1Q8NGK5 317 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 VSTM2LQ96N03 204 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CHRNA9Q9UGM1 479 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 MRPS7Q9Y2R9 242 aaKnown RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 KLF2Q9Y5W3 355 aaPredicted RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 DDX49Q9Y6V7 483 aaKnown RBP5.39□□□□□ -1.55
UBR3-210ENST00000484596 SF3B1O75533 1304 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBR3-210ENST00000484596 PARD3Q8TEW0 1356 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 ABCC11Q96J66 1382 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 TNS3Q68CZ2 1445 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 CEP350Q5VT06 3117 aa5.39□□□□□ -1.55
UBR3-210ENST00000484596 PARP4Q9UKK3 1724 aaKnown RBP5.38□□□□□ -1.55
UBR3-210ENST00000484596 RGPD3A6NKT7 1758 aaPredicted RBP5.38□□□□□ -1.55
UBR3-210ENST00000484596 COL18A1P39060 1754 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 RGPD4Q7Z3J3 1758 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 WASH3PC4AMC7 463 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 FBP2O00757 339 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 SDHDO14521 159 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 XPO1O14980 1071 aaKnown RBP5.38□□□□□ -1.55
UBR3-210ENST00000484596 MBD3O95983 291 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 ATP6V1C1P21283 382 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 TRIM23P36406 574 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 PEX3P56589 373 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 ITPK1Q13572 414 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 PDK4Q16654 411 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 CCDC57Q2TAC2 916 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 MAJINQ3KP22 176 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 DCAF4L1Q3SXM0 396 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 RHBDD2Q6NTF9 364 aa5.38□□□□□ -1.55
UBR3-210ENST00000484596 WASH2PQ6VEQ5 465 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms