RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RAMP1O60894 148 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ERLIN1O75477 346 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 CIB2O75838 187 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 SCGNO76038 276 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 B3GAT3O94766 335 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 IGLV2-11P01706 119 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 FCGR3AP08637 254 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF735P0CB33 412 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 PNMTP11086 282 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 PGCP20142 388 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 PEX19P40855 299 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 MAGEA5P43359 124 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 SLC7A2P52569 658 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 GSCP56915 257 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NTHL1P78549 312 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 EWSR1Q01844 656 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13A-211ENST00000484581 GBE1Q04446 702 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 FAM74A3Q4VXF1 159 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 BSPRYQ5W0U4 402 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZSCAN25Q6NSZ9 544 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 FAM71F2Q6NXP2 309 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ADAMTSL5Q6ZMM2 481 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 LANCL3Q6ZV70 420 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 RUFY3Q7L099 469 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NANOGNBQ7Z5D8 188 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 HSD11B1LQ7Z5J1 315 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 SAMD12Q8N8I0 201 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNRF1Q8ND25 227 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 OR1B1Q8NGR6 318 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF671Q8TAW3 534 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 LRRC15Q8TF66 581 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NABP1Q96AH0 204 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 TADA1Q96BN2 335 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF501Q96CX3 271 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-211ENST00000484581 C11orf24Q96F05 449 aaPredicted RBP3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NSMCE3Q96MG7 304 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 AMDHD1Q96NU7 426 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NODALQ96S42 347 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 PARLQ9H300 379 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 LIME1Q9H400 295 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 MOB1AQ9H8S9 216 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 SP140LQ9H930 580 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 SGK2Q9HBY8 427 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 ESM1Q9NQ30 184 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 NDE1Q9NXR1 346 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 PCSK1NQ9UHG2 260 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 TMED5Q9Y3A6 229 aa3.75□□□□□ -1.81
VPS13A-211ENST00000484581 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 GOLGA8OA6NCC3 632 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 OR52A4PA6NMU1 304 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 MPTX1A8MV57 137 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 E9PBE3 544 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 NPIPA7E9PJI5 369 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 GOLGA8NF8WBI6 632 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 K7ERI5 159 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 TFECO14948 347 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 LINC01565O15544 149 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 PPIHO43447 177 aaKnown RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 MED7O43513 233 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 EFNA2O43921 213 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 UQCRFS1P1P0C7P4 283 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 NPIPA8P0DM63 369 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 BRCC3P46736 316 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 AP3M2P53677 418 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 SRPXP78539 464 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 RAB35Q15286 201 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 LINC00242Q5T6M2 205 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 SLX4IPQ5VYV7 408 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 SCYL2Q6P3W7 929 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 CEACAM19Q7Z692 300 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 ACOT1Q86TX2 421 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 ZFAND4Q86XD8 727 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 TMEM123Q8N131 208 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 BBS5Q8N3I7 341 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 NECAB1Q8N987 351 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 STXBP6Q8NFX7 210 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 OR4D5Q8NGN0 318 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 FAM76AQ8TAV0 307 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 C11orf45Q8TAV5 145 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 C18orf25Q96B23 403 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 NTNG2Q96CW9 530 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 RASD2Q96D21 266 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 SDSLQ96GA7 329 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 ATXN7L3BQ96GX2 97 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 AGAP4Q96P64 663 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 LGMNQ99538 433 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 TMEM121Q9BTD3 319 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 CABLES2Q9BTV7 478 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 DUSP16Q9BY84 665 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 POLR3FQ9H1D9 316 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 ETNK2Q9NVF9 386 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 UTP6Q9NYH9 597 aaKnown RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 NPIPA1Q9UND3 350 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 CAB39Q9Y376 341 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-211ENST00000484581 MAD1L1Q9Y6D9 718 aa3.74□□□□□ -1.81
VPS13A-211ENST00000484581 K7EQG2 157 aa3.73□□□□□ -1.81
VPS13A-211ENST00000484581 OR7A17O14581 309 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms