RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MRPS30Q9NP92 439 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 C2orf42Q9NWW7 574 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 MRPL39Q9NYK5 338 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 POU2F3Q9UKI9 436 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 C15orf41Q9Y2V0 281 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
PTCD3-214ENST00000483925 SPATA31D1Q6ZQQ2 1576 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 AFF2P51816 1311 aa3.92□□□□□ -1.78
PTCD3-214ENST00000483925 INSRP06213 1382 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 A0A087WZ39 114 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 A0A1B0GVT2 93 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 LINC01553A4QN01 128 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 CCDC182A6NF36 153 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 FRG2CA6NGY1 282 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 C12orf71A8MTZ7 269 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PDLIM1O00151 329 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 EI24O14681 340 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 CASKO14936 926 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ATP6V0E1O15342 81 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF254O75437 659 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 STX11O75558 287 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 B3GAT3O94766 335 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 OR2F2O95006 317 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 POP4O95707 220 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 IGF1P05019 195 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 CYP19A1P11511 503 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 FGF5P12034 268 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 HOXB2P14652 356 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ACADSP16219 412 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 GSTM3P21266 225 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 AADACP22760 399 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 HPCAL1P37235 193 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 RPL13AP40429 203 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 MAGEA5P43359 124 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 RPL24P83731 157 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 EWSR1Q01844 656 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 GAGE5Q13069 117 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 GAGE6Q13070 117 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PPIL2Q13356 520 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 USF2Q15853 346 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 EXT1Q16394 746 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 RFTN2Q52LD8 501 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 TEX44Q53QW1 395 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 XKR6Q5GH73 641 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 TCHHL1Q5QJ38 904 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 IRAK1BP1Q5VVH5 260 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 MLIPQ5VWP3 458 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 C8orf82Q6P1X6 216 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 DEGS2Q6QHC5 323 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 STXBP4Q6ZWJ1 553 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 TPRA1Q86W33 373 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ERO1BQ86YB8 467 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 TBC1D10CQ8IV04 446 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 FAM9CQ8IZT9 166 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ARFGAP1Q8N6T3 406 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 MAB21L3Q8N8X9 362 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ASCC1Q8N9N2 400 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 OR10A7Q8NGE5 316 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 OR5M9Q8NGP3 310 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PRSS3P2Q8NHM4 247 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 CLHC1Q8NHS4 586 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 FBXO25Q8TCJ0 367 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PIBF1Q8WXW3 757 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 RAB1CQ92928 201 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ITFG2Q969R8 447 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ADIPOR1Q96A54 375 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SLC47A1Q96FL8 570 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 FAM210AQ96ND0 272 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 CATSPER2Q96P56 530 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF385AQ96PM9 386 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SLC38A2Q96QD8 506 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 KCNS3Q9BQ31 491 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 COMMD4Q9H0A8 199 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SHARPINQ9H0F6 387 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SLC25A51Q9H1U9 297 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 C8orf33Q9H7E9 229 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 C3orf14Q9HBI5 128 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SPACA1Q9HBV2 294 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SLC25A19Q9HC21 320 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 DUS2Q9NX74 493 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 ELOVL5Q9NYP7 299 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 UBAP1Q9NZ09 502 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 PURGQ9UJV8 347 aaKnown RBP3.91□□□□□ -1.78
PTCD3-214ENST00000483925 VANGL2Q9ULK5 521 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 KCNS2Q9ULS6 477 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 POLDIP2Q9Y2S7 368 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 DHRS7Q9Y394 339 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 HS3ST3B1Q9Y662 390 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 SYNJ2O15056 1496 aa3.91□□□□□ -1.78
PTCD3-214ENST00000483925 NPIPA5A0A0B4J1W7 369 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 A0A0J9YVX5 310 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 TRBV4-1A0A0J9YWV2 114 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 SNURFLB1AK76 121 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 HHLA1C9JL84 531 aa3.9□□□□□ -1.79
PTCD3-214ENST00000483925 E5RJQ4 531 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms