RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 IFT88Q13099 833 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 GLYR1Q49A26 553 aaPredicted RBP11.5□□□□□ -0.57
UBR4-213ENST00000483922 GGTA1PQ4G0N0 100 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 ALKBH2Q6NS38 261 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 ZDHHC24Q6UX98 284 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 MILR1Q7Z6M3 343 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 TMEM151AQ8N4L1 468 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 EXOSC8Q96B26 276 aaKnown RBP11.5□□□□□ -0.57
UBR4-213ENST00000483922 S100PBPQ96BU1 408 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 GPR52Q9Y2T5 361 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 AP4B1Q9Y6B7 739 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 IGLV3-32A0A0A0MS00 114 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 CCDC189A1A4V9 331 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 CCDC188H7C350 402 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 LINC01387J3KSC0 135 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 RAD51CO43502 376 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 GUCY1B2O75343 617 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 IGKV1D-16P01601 117 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 PSMB1P20618 241 aaKnown RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 PTNP21246 168 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 ARL1P40616 181 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 EIF1AXP47813 144 aaKnown RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 TRA2BP62995 288 aaKnown RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 FGFBP1Q14512 234 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 SGCBQ16585 318 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 LGSNQ5TDP6 509 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 OR10D3Q8NH80 312 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 ZNF483Q8TF39 744 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 ERP27Q96DN0 273 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 MTBPQ96DY7 904 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 C11orf24Q96F05 449 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 ZBED6CLQ96FA7 236 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
UBR4-213ENST00000483922 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 ELOVL6Q9H5J4 265 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 BRF2Q9HAW0 419 aa11.49□□□□□ -0.57
UBR4-213ENST00000483922 IGHV4-30-2A0A087WSY4 118 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 A0A0J9YW62 118 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 DPRXA6NFQ7 191 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 STX16-NPEPL1H3BU86 382 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 EIF1AYO14602 144 aaKnown RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 STX16O14662 325 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 EFNA2O43921 213 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 CXCL13O43927 109 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 OR4F21O95013 312 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 PSMG1O95456 288 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 IFNA2P01563 188 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 RPS17P08708 135 aaKnown RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 GANABQ14697 944 aaKnown RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 TAB1Q15750 504 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 SH2D4BQ5SQS7 431 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 GABRG1Q8N1C3 465 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 KBTBD8Q8NFY9 601 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 POC1BQ8TC44 478 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 FBXO25Q8TCJ0 367 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 C16orf78Q8WTQ4 265 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 APIPQ96GX9 242 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 FAIM2Q9BWQ8 316 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 C12orf49Q9H741 205 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 SLC35C2Q9NQQ7 365 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 VPS29Q9UBQ0 182 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
UBR4-213ENST00000483922 MCM8Q9UJA3 840 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 EMC9Q9Y3B6 208 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
UBR4-213ENST00000483922 GXYLT2A0PJZ3 443 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 MYO1GB0I1T2 1018 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 UPK1AO00322 258 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 MANBAO00462 879 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 ADAMDEC1O15204 470 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 RAMP1O60894 148 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 IL33O95760 270 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 TP53P04637 393 aaPredicted RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 SHC1P29353 583 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 TYK2P29597 1187 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 KRT20P35900 424 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 HSD17B3P37058 310 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 MAGEA12P43365 314 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 PLTPP55058 493 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 RPS3AP61247 264 aaKnown RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 FAPQ12884 760 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 ETFDHQ16134 617 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 CHRFAM7AQ494W8 412 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 ZNF672Q499Z4 452 aaPredicted RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 CYP27C1Q4G0S4 372 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 C6orf52Q5T4I8 152 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 PPP4R4Q6NUP7 873 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 BEND4Q6ZU67 534 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 ZNF619Q8N2I2 560 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 OR10H5Q8NGA6 315 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 GFM2Q969S9 779 aaKnown RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 TRMT61AQ96FX7 289 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms