RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 FAM120CQ9NX05 1096 aaKnown RBP16.78■□□□□ 0.28
SMIM4-204ENST00000482728 ALKBH4Q9NXW9 302 aa16.78■□□□□ 0.28
SMIM4-204ENST00000482728 ABCG2Q9UNQ0 655 aa16.78■□□□□ 0.28
SMIM4-204ENST00000482728 PCDHGB3Q9Y5G1 929 aa16.78■□□□□ 0.28
SMIM4-204ENST00000482728 WIF1Q9Y5W5 379 aa16.78■□□□□ 0.28
SMIM4-204ENST00000482728 C15orf38-AP3S2A0A0A6YYH1 394 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 A1L4Q6 167 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 FADS1O60427 444 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 UTS2O95399 124 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 POU6F2P78424 691 aaPredicted RBP16.77■□□□□ 0.28
SMIM4-204ENST00000482728 GSTA3Q16772 222 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 HSP90B2PQ58FF3 399 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 TMEM211Q6ICI0 200 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 OR5M10Q6IEU7 315 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 CDC73Q6P1J9 531 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 ZNF585AQ6P3V2 769 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 FIGNL1Q6PIW4 674 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 C6orf120Q7Z4R8 191 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 GLB1L3Q8NCI6 653 aaPredicted RBP16.77■□□□□ 0.28
SMIM4-204ENST00000482728 OR5AK3PQ8NH89 298 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 OTUB1Q96FW1 271 aaPredicted RBP16.77■□□□□ 0.28
SMIM4-204ENST00000482728 TEX37Q96LM6 180 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 OR52E6Q96RD3 313 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 STACQ99469 402 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 G6PC3Q9BUM1 346 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 TBL1XR1Q9BZK7 514 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 PIGUQ9H490 435 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 DUSP22Q9NRW4 184 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 ZNF446Q9NWS9 450 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 PPP4R1LQ9P1A2 415 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 TNFRSF10DQ9UBN6 386 aa16.77■□□□□ 0.28
SMIM4-204ENST00000482728 NCKAP5O14513 1909 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 FIGNL2A6NMB9 653 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
SMIM4-204ENST00000482728 SLC22A3O75751 556 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 KCNK2O95069 426 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 IGKV1D-16P01601 117 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 DGKQP52824 942 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 PHC1P78364 1004 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 PDCD4Q53EL6 469 aaKnown RBP16.76■□□□□ 0.27
SMIM4-204ENST00000482728 MRGPRGQ86SM5 289 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 GALNT10Q86SR1 603 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 YRDCQ86U90 279 aaKnown RBP16.76■□□□□ 0.27
SMIM4-204ENST00000482728 OR4K17Q8NGC6 315 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 CDS1Q92903 461 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 MARK4Q96L34 752 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 GPATCH2Q9NW75 528 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 GIN1Q9NXP7 522 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 FLRT3Q9NZU0 649 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 SPRR3Q9UBC9 169 aa16.76■□□□□ 0.27
SMIM4-204ENST00000482728 PLEKHB1Q9UF11 243 aaPredicted RBP16.76■□□□□ 0.27
SMIM4-204ENST00000482728 UTP20O75691 2785 aaKnown RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 UQCRHLA0A096LP55 91 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 RNF103-CHMP3A0A140T963 221 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 DUXAA6NLW8 204 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 SCN2BO60939 215 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 PGRP06401 933 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 GP1BBP13224 206 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 HPGDP15428 266 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 ATP6V1C1P21283 382 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 MATN1P21941 496 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 UQCRC2P22695 453 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 ACVR2AP27037 513 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 LCN1P31025 176 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 GAS1P54826 345 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 AQP5P55064 265 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 LRRC74AQ0VAA2 488 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 STX5Q13190 355 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 GRAMD1BQ3KR37 738 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 EIPR1Q53HC9 387 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 EMC4Q5J8M3 183 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 WIPI1Q5MNZ9 446 aaPredicted RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 EXOSC6Q5RKV6 272 aaKnown RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 XKRXQ6PP77 449 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 MAMDC2Q7Z304 686 aaPredicted RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 MARCH3Q86UD3 253 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 MIER2Q8N344 545 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 FAM83FQ8NEG4 500 aaPredicted RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 OR14L1PQ8NHC6 308 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 FAM110BQ8TC76 370 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 DUSP19Q8WTR2 217 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 PHF10Q8WUB8 498 aaKnown RBP16.75■□□□□ 0.27
SMIM4-204ENST00000482728 RNF138Q8WVD3 245 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 HHATLQ9HCP6 504 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 TCF7L2Q9NQB0 619 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 SLC6A5Q9Y345 797 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 HRH3Q9Y5N1 445 aa16.75■□□□□ 0.27
SMIM4-204ENST00000482728 C9JVG2 144 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 ADAM10O14672 748 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 IL6P05231 212 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 HOXD4P09016 255 aaPredicted RBP16.74■□□□□ 0.27
SMIM4-204ENST00000482728 ENDOUP21128 410 aaKnown RBP16.74■□□□□ 0.27
SMIM4-204ENST00000482728 IL12AP29459 219 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 CHI3L1P36222 383 aaPredicted RBP16.74■□□□□ 0.27
SMIM4-204ENST00000482728 IDH3AP50213 366 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 C17orf67Q0P5P2 114 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMIM4-204ENST00000482728 CCNJQ5T5M9 372 aa16.74■□□□□ 0.27
SMIM4-204ENST00000482728 CLEC4FQ8N1N0 589 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms