RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 A0A087WZY1 265 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 CASKO14936 926 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 LATO43561 262 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 SMPD2O60906 423 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 DUSP14O95147 198 aaKnown RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 AK1P00568 194 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 ACVR1BP36896 505 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 MDH1P40925 334 aaKnown RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 MAGEA9P43362 315 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 PRKCEQ02156 737 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 PLOD1Q02809 727 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 CAMK4Q16566 473 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 FAM120AOSQ5T036 256 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 NIPAL3Q6P499 406 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 ERICH1Q86X53 443 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 ZBTB44Q8NCP5 570 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 TFB1MQ8WVM0 346 aaKnown RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 TAF4BQ92750 862 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 PINX1Q96BK5 328 aaKnown RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 TBCDQ9BTW9 1192 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 COMMD4Q9H0A8 199 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 SLC25A51Q9H1U9 297 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 POLE3Q9NRF9 147 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 AURKCQ9UQB9 309 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
SF3B1-210ENST00000482158 U3KQV3 271 aa4.24□□□□□ -1.73
SF3B1-210ENST00000482158 USP6P35125 1406 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 CDX4O14627 284 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 IFNB1P01574 187 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 CHRNA1P02708 482 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 THRBP10828 461 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 NCF1P14598 390 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 UQCRBP14927 111 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 CDH5P33151 784 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 MDH2P40926 338 aaKnown RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 FNTAP49354 379 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 SLC25A1P53007 311 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 POLR2FP61218 127 aaKnown RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 PUDPQ08623 228 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 DCAF4L1Q3SXM0 396 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 PAN3Q58A45 887 aaKnown RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 OR5AU1Q8NGC0 362 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 TADA1Q96BN2 335 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 DHTKD1Q96HY7 919 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 ELMO2Q96JJ3 720 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 RWDD1Q9H446 243 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-210ENST00000482158 COQ10BQ9H8M1 238 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 MFHAS1Q9Y4C4 1052 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 AP4B1Q9Y6B7 739 aa4.23□□□□□ -1.73
SF3B1-210ENST00000482158 ESYT2A0FGR8 921 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 CLDN3O15551 220 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 EFNA2O43921 213 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 MBD3O95983 291 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 IGHV1-2P23083 117 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 TRPC1P48995 793 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 ASPHD2Q6ICH7 369 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 CBLN3Q6UW01 205 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 GET4Q7L5D6 327 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-210ENST00000482158 HSD11B1LQ7Z5J1 315 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 GRAMD2AQ8IUY3 354 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 C9orf40Q8IXQ3 194 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 GPR65Q8IYL9 337 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 BPIFB2Q8N4F0 458 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 SPEM1Q8N4L4 309 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 CD177Q8N6Q3 437 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 STKLD1Q8NE28 680 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 CCDC110Q8TBZ0 833 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 TBC1D31Q96DN5 1066 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 VSIG2Q96IQ7 327 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 HPDLQ96IR7 371 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 CASD1Q96PB1 797 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 SIGLEC12Q96PQ1 595 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 VPS35Q96QK1 796 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 RHOJQ9H4E5 214 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 MIEF1Q9NQG6 463 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 EHFQ9NZC4 300 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 GALPQ9UBC7 116 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 RNF6Q9Y252 685 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 ADAMTS9Q9P2N4 1935 aa4.22□□□□□ -1.73
SF3B1-210ENST00000482158 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 GPAA1O43292 621 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 NUDT21O43809 227 aaKnown RBP4.21□□□□□ -1.74
SF3B1-210ENST00000482158 NOL4O94818 638 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 ANXA3P12429 323 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 PTBP1P26599 531 aaKnown RBP eCLIP4.21□□□□□ -1.74
SF3B1-210ENST00000482158 GDF1P27539 372 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 XCR1P46094 333 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 MEOX2P50222 304 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 EMDP50402 254 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 CYP51A1Q16850 503 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF311Q5JNZ3 666 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 UFSP1Q6NVU6 142 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 LRRC8BQ6P9F7 803 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 GPR137CQ8N3F9 429 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 ARNTL2Q8WYA1 636 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 C18orf25Q96B23 403 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms