RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 MAGEA4P43358 317 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 ASCL1P50553 236 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 EEF1A1P68104 462 aaKnown RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SORDQ00796 357 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 CRYZQ08257 329 aaKnown RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 DLG1Q12959 904 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SNTA1Q13424 505 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 DDX39BQ13838 428 aaKnown RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 GTF2H2Q13888 395 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 RPS6KA2Q15349 733 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PFKFB4Q16877 469 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 C6orf163Q5TEZ5 329 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PRAMEF20Q5VT98 475 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 EEF1A1P5Q5VTE0 462 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 NSUN5P2Q63ZY6 315 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 OR52E8Q6IFG1 317 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 GTF2H2CQ6P1K8 395 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SCIMPQ6UWF3 145 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PAGE2Q7Z2X7 111 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 NUDT13Q86X67 352 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 GSPT2Q8IYD1 628 aaKnown RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SPATA4Q8NEY3 305 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 OR10G3Q8NGC4 313 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 OR4K14Q8NGD5 310 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 WDR20Q8TBZ3 569 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SPPL2AQ8TCT8 520 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 ADIPOR1Q96A54 375 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 NXNL1Q96CM4 212 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 NTNG2Q96CW9 530 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 HSPBAP1Q96EW2 488 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 RMND5BQ96G75 393 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 TMEM41AQ96HV5 264 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 JSRP1Q96MG2 331 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 ZFP3Q96NJ6 502 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 MTERF1Q99551 399 aaKnown RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SERPINI1Q99574 410 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 TIMP4Q99727 224 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SH3GL2Q99962 352 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 ZNF717Q9BY31 904 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 ANGPTL4Q9BY76 406 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 RAB17Q9H0T7 212 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 UBQLN3Q9H347 655 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 CXorf21Q9HAI6 301 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 CCM2LQ9NUG4 571 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-216ENST00000481048 AHSPQ9NZD4 102 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 SPRR3Q9UBC9 169 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PSME2Q9UL46 239 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 TMCO1Q9UM00 188 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 TLN2Q9Y4G6 2542 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 PRR14LQ5THK1 2151 aa5.89□□□□□ -1.47
LRCH3-216ENST00000481048 C15orf38-AP3S2A0A0A6YYH1 394 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 A0A1W2PR48 441 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 MBD3L4A6NDZ8 208 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 MBD3L3A6NE82 208 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 TUBAL3A6NHL2 446 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 GOLGA6L10A6NI86 522 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 MBD3L5A6NJ08 208 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 A6NNC1 897 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 SAP18O00422 153 aaKnown RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 ACOX3O15254 700 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 RAD51CO43502 376 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 TMPRSS11DO60235 418 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 SH3BGRLO75368 114 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CLDN9O95484 217 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 ACTL6AO96019 429 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 C2P06681 752 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 RBP1P09455 135 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 FAM153BP0C7A2 387 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 RHOXF2BP0C7M4 288 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 GFAPP14136 432 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CPN1P15169 458 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 PORP16435 677 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 BMP5P22003 454 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CTSSP25774 331 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 UQCRC1P31930 480 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 OPRM1P35372 400 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 GCKP35557 465 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CASP3P42574 277 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 PCYT1AP49585 367 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CDK9P50750 372 aaKnown RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 PLTPP55058 493 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 DCAF7P61962 342 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 RPS13P62277 151 aaKnown RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 PSPHP78330 225 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 GUCY2DQ02846 1103 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 RCAN2Q14206 197 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 SLMAPQ14BN4 828 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 TIGD3Q6B0B8 471 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 SLC30A6Q6NXT4 461 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 DGAT2L6Q6ZPD8 337 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 SEM1Q6ZVN7 128 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 NUP54Q7Z3B4 507 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CMC1Q7Z7K0 106 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 MYLK4Q86YV6 388 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-216ENST00000481048 ZZZ3Q8IYH5 903 aa5.88□□□□□ -1.47
LRCH3-216ENST00000481048 CENPLQ8N0S6 344 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms