RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM121Q9BTD3 319 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 TSSK1BQ9BXA7 367 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 PARD6BQ9BYG5 372 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 NEK6Q9HC98 313 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 POLE4Q9NR33 117 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 SLC2A8Q9NY64 477 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 PISDQ9UG56 409 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 NPIPA1Q9UND3 350 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 C15orf61A6NNL5 157 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 HHLA1C9JL84 531 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 ABCD4O14678 606 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TM9SF1O15321 606 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SRPX2O60687 465 aaPredicted RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 N4BP1O75113 896 aaKnown RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 UPK3AO75631 287 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 HSMCR30P0CW71 290 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TROVE2P10155 538 aaKnown RBP eCLIP4.5□□□□□ -1.69
COPA-203ENST00000481040 AOC1P19801 751 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 NF2P35240 595 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TSFMP43897 325 aaKnown RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 OR1G1P47890 313 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 P2RY1P47900 373 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 EMDP50402 254 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TPMTP51580 245 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 LINC00205P59089 165 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 DHODHQ02127 395 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 ENPEPQ07075 957 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 CD226Q15762 336 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 IZUMO4Q1ZYL8 232 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SNAI3Q3KNW1 292 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SFT2D3Q587I9 215 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 C6orf226Q5I0X4 101 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SPANXN2Q5MJ10 180 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SLC35E4Q6ICL7 350 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 OR2A2Q6IF42 318 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 PRR5LQ6MZQ0 368 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 GDPD4Q6W3E5 623 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 HSD11B1LQ7Z5J1 315 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TMCO2Q7Z6W1 182 aaPredicted RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 MOB3BQ86TA1 216 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TGIF2LXQ8IUE1 241 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 CLEC4FQ8N1N0 589 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 GPR137CQ8N3F9 429 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 RAB42Q8N4Z0 105 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 Q8N9G6 341 aaPredicted RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 NUDCD2Q8WVJ2 157 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 PCNPQ8WW12 178 aaKnown RBP4.5□□□□□ -1.69
COPA-203ENST00000481040 BIRC7Q96CA5 298 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 COPS8Q99627 209 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SLC6A7Q99884 636 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 C11orf70Q9BRQ4 267 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 SLC29A3Q9BZD2 475 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 STRADBQ9C0K7 418 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 NT5DC2Q9H857 520 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 TAS2R16Q9NYV7 291 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 ICAM5Q9UMF0 924 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 CA5BQ9Y2D0 317 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 PCDHGB1Q9Y5G3 927 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 NPTNQ9Y639 398 aa4.5□□□□□ -1.69
COPA-203ENST00000481040 PHLPP2Q6ZVD8 1323 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 LRP5LA4QPB2 252 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 OR2AG2A6NM03 316 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 FBP2O00757 339 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 PPIHO43447 177 aaKnown RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 SMAD6O43541 496 aaKnown RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 FGF17O60258 216 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 LRATO95237 230 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 F10P00742 488 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 KRT14P02533 472 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 HOXB7P09629 217 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 POLR2MP0CAP2 368 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 FOSL2P15408 326 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 SELEP16581 610 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 MMP11P24347 488 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 EPS15P42566 896 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 SLC1A4P43007 532 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 STK19P49842 368 aaPredicted RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 ZNF85Q03923 595 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 RGS1Q08116 209 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 C1orf61Q13536 156 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 IL18Q14116 193 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 TMEM187Q14656 261 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 RAB35Q15286 201 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 MLF2Q15773 248 aaPredicted RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 FAM189A2Q15884 450 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 ECSCRQ19T08 205 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 KNOP1Q1ED39 458 aaKnown RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 SPSB3Q6PJ21 355 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 C19orf48Q6RUI8 117 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 VITQ6UXI7 678 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 ADAMTSL5Q6ZMM2 481 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 BZW1Q7L1Q6 419 aaKnown RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 ZNF771Q7L3S4 317 aaPredicted RBP4.49□□□□□ -1.69
COPA-203ENST00000481040 CATSPERDQ86XM0 798 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 EGFL6Q8IUX8 553 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 MFSD9Q8NBP5 474 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 OR51G2Q8NGK0 314 aa4.49□□□□□ -1.69
COPA-203ENST00000481040 ANKRD49Q8WVL7 239 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms