RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MRTO4Q9UKD2 239 aaKnown RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 ABCG2Q9UNQ0 655 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 PTGDR2Q9Y5Y4 395 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 NF1P21359 2839 aa13.77□□□□□ -0.2
LIMS3-203ENST00000480744 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 A8MXE2 369 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 H0YC42 278 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 H3BML4 177 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 COPEO14579 308 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 TNFSF13O75888 250 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 ATE1O95260 518 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 IL33O95760 270 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 HRGP04196 525 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 UROSP10746 265 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 CPA3P15088 417 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 GABRA3P34903 492 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 CCT5P48643 541 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 PSMD4P55036 377 aaKnown RBP13.77□□□□□ -0.21
LIMS3-203ENST00000480744 TPD52P55327 224 aaPredicted RBP13.77□□□□□ -0.21
LIMS3-203ENST00000480744 DNAJB13P59910 316 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 BCL2A1Q16548 175 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 ZNF551Q7Z340 670 aaPredicted RBP13.77□□□□□ -0.21
LIMS3-203ENST00000480744 SZRD1Q7Z422 152 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 DUSP19Q8WTR2 217 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 FIG4Q92562 907 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 MBD6Q96DN6 1003 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 EGLN2Q96KS0 407 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 FAM111AQ96PZ2 611 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 PINK1Q9BXM7 581 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 TBL1XR1Q9BZK7 514 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 RTN4RQ9BZR6 473 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 PLEKHF2Q9H8W4 249 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 NDRG3Q9UGV2 375 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 WBP11Q9Y2W2 641 aaKnown RBP13.77□□□□□ -0.21
LIMS3-203ENST00000480744 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
LIMS3-203ENST00000480744 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
LIMS3-203ENST00000480744 GXYLT2A0PJZ3 443 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 PDPK1O15530 556 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 AKAP10O43572 662 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 GOSR1O95249 250 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 KCNH1O95259 989 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 UTS2O95399 124 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 PSMG1O95456 288 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 CRHR1P34998 444 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 EEFSECP57772 596 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 GANABQ14697 944 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 DEFB113Q30KQ7 82 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 VWA1Q6PCB0 445 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 SH2D5Q6ZV89 423 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 GPR151Q8TDV0 419 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 EPS8L3Q8TE67 593 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 PIK3R3Q92569 461 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 CIDECQ96AQ7 238 aaPredicted RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 PGM2Q96G03 612 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 LMF2Q9BU23 707 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 LRTM1Q9HBL6 345 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 C1orf109Q9NX04 203 aa13.76□□□□□ -0.21
LIMS3-203ENST00000480744 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
LIMS3-203ENST00000480744 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
LIMS3-203ENST00000480744 OR2M5A3KFT3 312 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 SLC28A1O00337 649 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 MSTNO14793 375 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 RGS14O43566 566 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 CRHP06850 196 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 PRPS2P11908 318 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 SUCLG1P53597 346 aaKnown RBP13.75□□□□□ -0.21
LIMS3-203ENST00000480744 PRKAG1P54619 331 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 ADAM8P78325 824 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 FAM27E3Q08E93 113 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 GRAMD1BQ3KR37 738 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 LIPMQ5VYY2 423 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 PPP4R4Q6NUP7 873 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 GALNT10Q86SR1 603 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 C4orf33Q8N1A6 199 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 CLHC1Q8NHS4 586 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 FBXO30Q8TB52 745 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 PPCDCQ96CD2 204 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 STARD4Q96DR4 205 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 TSSK3Q96PN8 268 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 PIGQQ9BRB3 760 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 KLHL28Q9NXS3 571 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
LIMS3-203ENST00000480744 HEATR5AQ86XA9 2040 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 SHISA8B8ZZ34 492 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 AZIN1O14977 448 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 ANGPTL1O95841 491 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 IGKV1D-16P01601 117 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 KRT4P19013 534 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 CD79BP40259 229 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 KCNJ5P48544 419 aa13.74□□□□□ -0.21
LIMS3-203ENST00000480744 CLDN15P56746 228 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms