RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 NATD1Q8N6N6 113 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 FBXO30Q8TB52 745 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 PIK3R3Q92569 461 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 PKNOX2Q96KN3 472 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 TM9SF2Q99805 663 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 PAIP2Q9BPZ3 127 aaKnown RBP13.93□□□□□ -0.18
CDK9-203ENST00000480353 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 ZCCHC3Q9NUD5 404 aaKnown RBP13.93□□□□□ -0.18
CDK9-203ENST00000480353 MED11Q9P086 117 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 ZDHHC2Q9UIJ5 367 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 FOXD3Q9UJU5 478 aaPredicted RBP13.93□□□□□ -0.18
CDK9-203ENST00000480353 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
CDK9-203ENST00000480353 DOCK7Q96N67 2140 aa13.93□□□□□ -0.18
CDK9-203ENST00000480353 UQCRHLA0A096LP55 91 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 GXYLT2A0PJZ3 443 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 ESPNB1AK53 854 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 TM9SF1O15321 606 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 TYROBPO43914 113 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 GMFGO60234 142 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 PSMG1O95456 288 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 PEPDP12955 493 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 IGFBP2P18065 325 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 POU3F2P20265 443 aaPredicted RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 CHMP24386 653 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 KIR2DL3P43628 341 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 CPA2P48052 419 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 STARP49675 285 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 AGFG1P52594 562 aaKnown RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 EEFSECP57772 596 aaKnown RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 C17orf67Q0P5P2 114 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 PDE7AQ13946 482 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 LSM12Q3MHD2 195 aaKnown RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 UGT3A2Q3SY77 523 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 IL23RQ5VWK5 629 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 FBXW10Q5XX13 1052 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 ZCCHC12Q6PEW1 402 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 MARCH3Q86UD3 253 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 KIF18BQ86Y91 864 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 UBQLNLQ8IYU4 475 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 KIRREL3Q8IZU9 778 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 MEIOBQ8N635 442 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 COX18Q8N8Q8 333 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 NAXEQ8NCW5 288 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 OR7A2PQ8NGA2 310 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 DUSP19Q8WTR2 217 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 NTNG2Q96CW9 530 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 PPP1R36Q96LQ0 422 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 ZFP3Q96NJ6 502 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 TUBA1CQ9BQE3 449 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 YIPF4Q9BSR8 244 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 STOML1Q9UBI4 398 aa13.92□□□□□ -0.18
CDK9-203ENST00000480353 FAF1Q9UNN5 650 aaPredicted RBP13.92□□□□□ -0.18
CDK9-203ENST00000480353 MBD3L4A6NDZ8 208 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 MBD3L3A6NE82 208 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 MBD3L5A6NJ08 208 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 CLCA1A8K7I4 914 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 KDM4EB2RXH2 506 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 BIRC5O15392 142 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ANGPTL1O95841 491 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 SERPINE1P05121 402 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ATP6V1C1P21283 382 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ZNF136P52737 540 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 GAS1P54826 345 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 GFRA1P56159 465 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 PTGR1Q14914 329 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 PDCD2Q16342 344 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 XKR7Q5GH72 579 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 C6orf136Q5SQH8 315 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 GALNT10Q86SR1 603 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 CDH24Q86UP0 819 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ZZZ3Q8IYH5 903 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ACBD4Q8NC06 268 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 RELL2Q8NC24 303 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 OR2M3Q8NG83 312 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 OR6Y1Q8NGX8 325 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 GOT1L1Q8NHS2 421 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 MBD3L2Q8NHZ7 208 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 RNASE6Q93091 150 aaKnown RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 PIGQQ9BRB3 760 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 G6PC3Q9BUM1 346 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 SSU72Q9NP77 194 aaKnown RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 NOP53Q9NZM5 478 aaKnown RBP13.91□□□□□ -0.18
CDK9-203ENST00000480353 FLRT3Q9NZU0 649 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ATP6V1HQ9UI12 483 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 ABCA12Q86UK0 2595 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 KIAA1549Q9HCM3 1950 aa13.91□□□□□ -0.18
CDK9-203ENST00000480353 MED12Q93074 2177 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 APCP25054 2843 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 H3BML4 177 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 LINC01387J3KSC0 135 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SYT5O00445 386 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 SCDO00767 359 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 NDUFB5O43674 189 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 FADS1O60427 444 aa13.9□□□□□ -0.18
CDK9-203ENST00000480353 NKX2-2O95096 273 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms