RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CDK10Q15131 360 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 C6orf132Q5T0Z8 1188 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 FRRS1Q6ZNA5 592 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 NKAIN4Q8IVV8 208 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 C12orf76Q8N812 135 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 SCARF2Q96GP6 870 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 C10orf90Q96M02 699 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 ATF6BQ99941 703 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 C1QTNF7Q9BXJ2 289 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 RERGLQ9H628 205 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 H2AFY2Q9P0M6 372 aaPredicted RBP23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 PCDH10Q9P2E7 1040 aa23.01■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR52A4PA6NMU1 304 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZIC2O95409 532 aaPredicted RBP23■■□□□ 1.27
SYNGAP1-206ENST00000479510 EVX1P49640 407 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 PDX1P52945 283 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 RGS1Q08116 209 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 PUS10Q3MIT2 529 aaKnown RBP23■■□□□ 1.27
SYNGAP1-206ENST00000479510 TJAP1Q5JTD0 557 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 TMEM240Q5SV17 173 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 TRIQKQ629K1 86 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 NRMQ8IXM6 262 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 LRRC25Q8N386 305 aaPredicted RBP23■■□□□ 1.27
SYNGAP1-206ENST00000479510 C19orf18Q8NEA5 215 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 ATP6V1C2Q8NEY4 427 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 NT5CQ8TCD5 201 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 BRIX1Q8TDN6 353 aaKnown RBP23■■□□□ 1.27
SYNGAP1-206ENST00000479510 GANCQ8TET4 914 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 ACOT12Q8WYK0 555 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZDHHC4Q9NPG8 344 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 SPHK1Q9NYA1 384 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 PHF11Q9UIL8 331 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 CBLCQ9ULV8 474 aa23■■□□□ 1.27
SYNGAP1-206ENST00000479510 A0A1W2PS29 197 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 CENPBD1B2RD01 187 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 TFECO14948 347 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC19A2O60779 497 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 THBS1P07996 1170 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 SLC2A2P11168 524 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 MAP2K3P46734 347 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 RNF144AP50876 292 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 ARHGAP11BQ3KRB8 267 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 CNIH2Q6PI25 160 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 VITQ6UXI7 678 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 SHFQ7M4L6 423 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 PAQR7Q86WK9 346 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR4F15Q8NGB8 312 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 NEIL3Q8TAT5 605 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 FN3KQ9H479 309 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 SERGEFQ9UGK8 458 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 NDRG2Q9UN36 371 aaKnown RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 LINC00854A0A1B0GVQ3 168 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 J3QRE1 110 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 GABRPO00591 440 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 LATO43561 262 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 LALBAP00709 142 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 FCARP24071 287 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 CD79BP40259 229 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 BTN3A2P78410 334 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 PSRC1Q6PGN9 363 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZNF322Q6U7Q0 402 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 ADGRD2Q7Z7M1 963 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 MARCH9Q86YJ5 346 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 ASCC1Q8N9N2 400 aaKnown RBP22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 DUSP18Q8NEJ0 188 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 KAT2AQ92830 837 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 KLK6Q92876 244 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 COMMD3Q9UBI1 195 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 TNFRSF10DQ9UBN6 386 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 GPSM3Q9Y4H4 160 aa22.99■■□□□ 1.27
SYNGAP1-206ENST00000479510 A0A1W2PP55 124 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 THY1P04216 161 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 YES1P07947 543 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 NDUFS1P28331 727 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 KIR2DL3P43628 341 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 TNFRSF17Q02223 184 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 OR2L13Q8N349 312 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 Q8N402 240 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 GDF15Q99988 308 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 RBFOX1Q9NWB1 397 aaKnown RBP22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 PTGFRNQ9P2B2 879 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 PLEKHM1Q9Y4G2 1056 aa22.98■■□□□ 1.27
SYNGAP1-206ENST00000479510 FCMRO60667 390 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 PRKAR1AP10644 381 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 CELP19835 753 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 SOX18P35713 384 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 GPR4P46093 362 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 DUSP8Q13202 625 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 C2orf27AQ580R0 203 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 RNF113BQ8IZP6 322 aaKnown RBP22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 KCNN2Q9H2S1 579 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 WDR45Q9Y484 360 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 APODP05090 189 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 ATP6V1E1P36543 226 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 ZNF776Q68DI1 518 aaPredicted RBP22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 PLET1Q6UQ28 207 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 ASPGQ86U10 573 aa22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 RANBP3LQ86VV4 465 aaPredicted RBP22.97■■□□□ 1.27
SYNGAP1-206ENST00000479510 GALNT12Q8IXK2 581 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms