RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 COQ9O75208 318 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
DDX56-210ENST00000479440 SYNGR4O95473 234 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 ESRRBO95718 433 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 THBS1P07996 1170 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 GSTA2P09210 222 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 ZNF17P17021 662 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 CASP9P55211 416 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 IRF9Q00978 393 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 LGSNQ5TDP6 509 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 GAS2L3Q86XJ1 694 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 CCDC116Q8IYX3 515 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 PPM1NQ8N819 430 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 KAT2AQ92830 837 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 C11orf24Q96F05 449 aaPredicted RBP14.38□□□□□ -0.11
DDX56-210ENST00000479440 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 HDHD5Q9BXW7 423 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 ANKRA2Q9H9E1 313 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 GIMAP4Q9NUV9 329 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 NMRK1Q9NWW6 199 aa14.38□□□□□ -0.11
DDX56-210ENST00000479440 IL32P24001 234 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 AGTR1P30556 359 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 THBS2P35442 1172 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 NUDT6P53370 316 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 GALNT1Q10472 559 aaPredicted RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 NAB1Q13506 487 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 TMEM249Q2WGJ8 235 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 DNAJC14Q6Y2X3 702 aaPredicted RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 C3orf62Q6ZUJ4 267 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 EXOC3L1Q86VI1 746 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 WDR75Q8IWA0 830 aaKnown RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 FAM9CQ8IZT9 166 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 OR4N2Q8NGD1 307 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 OR10D3Q8NH80 312 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 MTBPQ96DY7 904 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 TRAF4Q9BUZ4 470 aaPredicted RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 POTEKPQ9BYX7 375 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 C12orf49Q9H741 205 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 BRF2Q9HAW0 419 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 FAM120CQ9NX05 1096 aaKnown RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 XPR1Q9UBH6 696 aa14.37□□□□□ -0.11
DDX56-210ENST00000479440 MRTO4Q9UKD2 239 aaKnown RBP14.37□□□□□ -0.11
DDX56-210ENST00000479440 IGHV4-30-2A0A087WSY4 118 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 SSX4O60224 188 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 FADS1O60427 444 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 PYGBP11216 843 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 STX2P32856 288 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 PSMD4P55036 377 aaKnown RBP14.36□□□□□ -0.11
DDX56-210ENST00000479440 VLDLRP98155 873 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 TRAF3Q13114 568 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 DECR1Q16698 335 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX56-210ENST00000479440 PGGHGQ32M88 737 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 SGO1Q5FBB7 561 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 SH2D4BQ5SQS7 431 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 GTF2IRD2BQ6EKJ0 949 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 FIGNL1Q6PIW4 674 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 CLEC2AQ6UVW9 174 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 GTF2IRD2Q86UP8 949 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
DDX56-210ENST00000479440 KBTBD8Q8NFY9 601 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 SELENOMQ8WWX9 145 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 USB1Q9BQ65 265 aaKnown RBP14.36□□□□□ -0.11
DDX56-210ENST00000479440 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 GDF2Q9UK05 429 aaPredicted RBP14.36□□□□□ -0.11
DDX56-210ENST00000479440 SNX24Q9Y343 169 aa14.36□□□□□ -0.11
DDX56-210ENST00000479440 CCDC188H7C350 402 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 GPRIN2O60269 458 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 PLOD3O60568 738 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 NDUFS7O75251 213 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 NME6O75414 186 aaPredicted RBP14.35□□□□□ -0.11
DDX56-210ENST00000479440 KLHL2O95198 593 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 ADH6P28332 368 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 DSCR9P59020 149 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 PSG6Q00889 435 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 TMEM44Q2T9K0 475 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 CYP27C1Q4G0S4 372 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 GALNT10Q86SR1 603 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 DTX2Q86UW9 622 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 C1orf52Q8N6N3 182 aaKnown RBP14.35□□□□□ -0.11
DDX56-210ENST00000479440 OR4F6Q8NGB9 312 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 HSD17B8Q92506 261 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 NEUROG1Q92886 237 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 EXOSC8Q96B26 276 aaKnown RBP14.35□□□□□ -0.11
DDX56-210ENST00000479440 ADGRG7Q96K78 797 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 ADAD1Q96M93 576 aaKnown RBP14.35□□□□□ -0.11
DDX56-210ENST00000479440 TNFRSF13CQ96RJ3 184 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 TBL1XR1Q9BZK7 514 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 SHCBP1LQ9BZQ2 653 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 TRIM2Q9C040 744 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 HHATLQ9HCP6 504 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 Q9N2J8 555 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 NFU1Q9UMS0 254 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms