RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ARF4P18085 180 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 AOC1P19801 751 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 UGT1A4P22310 534 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 SLC6A8P48029 635 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 GPC3P51654 580 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 RPL27P61353 136 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 LY6DQ14210 128 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 KNOP1Q1ED39 458 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 LRRC26Q2I0M4 334 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 LIPJQ5W064 366 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 RHBDD2Q6NTF9 364 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAAP20Q6NZ36 180 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF613Q6PF04 617 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 CASC1Q6TDU7 716 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 GDPGP1Q6ZNW5 385 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 GET4Q7L5D6 327 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ADGRD2Q7Z7M1 963 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 LRRTM1Q86UE6 522 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 METTL4Q8N3J2 472 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ANKRD20A12PQ8NF67 263 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 RDH11Q8TC12 318 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 GTF3AQ92664 365 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 SPZ1Q9BXG8 430 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 KCNK13Q9HB14 408 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 IL1RAPQ9NPH3 570 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 HPS4Q9NQG7 708 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 HPF1Q9NWY4 346 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ERVK-18Q9QC07 812 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 BAIAP2L1Q9UHR4 511 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ISY1Q9ULR0 285 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 MRPL11Q9Y3B7 192 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 Q9Y3F1 56 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 CLCA3PQ9Y6N3 262 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF724A8MTY0 619 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 MEI4A8MW99 385 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZBTB5O15062 677 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ANXA9O76027 345 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIM16O95361 564 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 PDGFBP01127 241 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIM49P0CI25 452 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIM49CP0CI26 452 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALM1P0DP23 149 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALM2P0DP24 149 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALM3P0DP25 149 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 DNAJB1P25685 340 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 RPA1P27694 616 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CCND2P30279 289 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 AKT2P31751 481 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 KIF5BP33176 963 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ACADSBP45954 432 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CAMLGP49069 296 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 NDST1P52848 882 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 NLRP11P59045 1033 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 RPS6P62753 249 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 HTD2P86397 168 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 NFATC2Q13469 925 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 KLF5Q13887 457 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 SLC17A1Q14916 467 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 NECTIN1Q15223 517 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 P2RY14Q15391 338 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 INAQ16352 499 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 QRICH1Q2TAL8 776 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF528Q3MIS6 628 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 LRIT3Q3SXY7 679 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 FASTKD1Q53R41 847 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TAF1BQ53T94 588 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 DDI2Q5TDH0 399 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 IL23RQ5VWK5 629 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 STOX1Q6ZVD7 989 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 BNIPLQ7Z465 357 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ADCK1Q86TW2 530 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 YRDCQ86U90 279 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 LRRC17Q8N6Y2 441 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 OR52B6Q8NGF0 335 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 OR56B1Q8NGI3 324 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 PNPLA2Q96AD5 504 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TMEM45BQ96B21 275 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 GLT1D1Q96MS3 346 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 LZTS2Q9BRK4 669 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 NMNAT2Q9BZQ4 307 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 PLEKHA3Q9HB20 300 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 LY9Q9HBG7 655 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TAS2R3Q9NYW6 316 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 CNOT2Q9NZN8 540 aaKnown RBP3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 EPS15L1Q9UBC2 864 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 TCHHQ07283 1943 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 ANK1P16157 1881 aa3.3□□□□□ -1.88
CDC42BPA-212ENST00000478573 AGRNO00468 2067 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 LOC390937A0A1W2PQ73 354 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 BCLAF3A2AJT9 711 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SOCS3O14543 225 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CTAGE5O15320 804 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 TXNL1O43396 289 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 BUB1O43683 1085 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 IDH3BO43837 385 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SNAP91O60641 907 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALCAP01258 141 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASGR1P07306 291 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms