RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 INPP5KQ9BT40 448 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 RTN4RQ9BZR6 473 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 MYOZ1Q9NP98 299 aaPredicted RBP6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 LYARQ9NX58 379 aaKnown RBP6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 PAQR5Q9NXK6 330 aaPredicted RBP6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 PPP4R1LQ9P1A2 415 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 POU2F3Q9UKI9 436 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 MCTS1Q9ULC4 181 aaKnown RBP6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 MGAT4BQ9UQ53 548 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 PLLPQ9Y342 182 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 SPEF1Q9Y4P9 236 aa6.45□□□□□ -1.38
SPTLC1-205ENST00000477888 SHISA8B8ZZ34 492 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CXCL13O43927 109 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 RPLP1P05386 114 aaKnown RBP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TPM3P06753 285 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TPM1P09493 284 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 DHRS4L1P0CG22 281 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CT45A8P0DMV1 189 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CT45A9P0DMV2 189 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 HKR1P10072 659 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 EPB42P16452 691 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF37AP17032 561 aaPredicted RBP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 NT5EP21589 574 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 PCMT1P22061 227 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 PTAFRP25105 342 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CD40P25942 277 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 GIFP27352 417 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SERPINB1P30740 379 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 BSGP35613 385 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MAGEA3P43357 314 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 PNLIPRP2P54317 469 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 IRF8Q02556 426 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SCGB2A2Q13296 93 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 EFR3AQ14156 821 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MORF4L2Q15014 288 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TGFBIQ15582 683 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TSNQ15631 228 aaKnown RBP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 STK11Q15831 433 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 PDK4Q16654 411 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TRMT12Q53H54 448 aaKnown RBP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CT45A2Q5DJT8 189 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 FBXO48Q5FWF7 155 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 GTF2IRD2BQ6EKJ0 949 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 OR52E8Q6IFG1 317 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MED27Q6P2C8 311 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TMEM108Q6UXF1 575 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 Q6ZT83 130 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 LARP4Q71RC2 724 aaKnown RBP eCLIP6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 GALNT7Q86SF2 657 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 GTF2IRD2Q86UP8 949 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 P2RY8Q86VZ1 359 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TDRPQ86YL5 185 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 VSTM4Q8IW00 320 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 CNTN4Q8IWV2 1026 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 TUSC5Q8IXB3 177 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SVOPLQ8N434 492 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 RNF175Q8N4F7 328 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 ZDHHC22Q8N966 263 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 OR4K14Q8NGD5 310 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 OR52R1Q8NGF1 315 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 UBE2E3Q969T4 207 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MTBPQ96DY7 904 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SIGLEC10Q96LC7 697 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 PTGES2Q9H7Z7 377 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 WDR41Q9HAD4 459 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SAYSD1Q9NPB0 183 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 SMYD2Q9NRG4 433 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MED29Q9NX70 200 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 MAT2BQ9NZL9 334 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 BCAP29Q9UHQ4 241 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 FKBP7Q9Y680 259 aa6.44□□□□□ -1.38
SPTLC1-205ENST00000477888 NPIPA5A0A0B4J1W7 369 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 NCF1BA6NI72 391 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 NCF1CA8MVU1 366 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 NPIPA7E9PJI5 369 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 FADS1O60427 444 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 STK16O75716 305 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 LYZL6O75951 148 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 SYNGR4O95473 234 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 STAMBPO95630 424 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 OPN1LWP04000 364 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ATP1B1P05026 303 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 NPIPA8P0DM63 369 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PCNAP12004 261 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 NCF1P14598 390 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PORP16435 677 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 HSD3B2P26439 372 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ZFP36P26651 326 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 APEX1P27695 318 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 APOBEC3AP31941 199 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 RBMXP38159 391 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PIK3CBP42338 1070 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 HSPA7P48741 367 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 RAP1GDS1P52306 607 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CHN2P52757 468 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 TERF1P54274 439 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms